EuRBPDB

Description

Ensembl ID: MGP_NODShiLtJ_G0028769 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpr
Alias: 2610003J05Rik|2610528B01Rik|Hnrpr|Hnrpr {ECO:0000313|EMBL:AAH38051.1,GN ECO:0000313|MGI:MGI:1891692}|hnRNPR
Full Name: heterogeneous nuclear ribonucleoprotein R
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 55038 bases
Position: chr4:151948340-152003377
Accession: 1891692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0068321	RRM_1	PF00076.22	2e-43	1	3
MGP_NODShiLtJ_P0068321	RRM_1	PF00076.22	2e-43	2	3
MGP_NODShiLtJ_P0068321	RRM_1	PF00076.22	2e-43	3	3
MGP_NODShiLtJ_P0068324	RRM_1	PF00076.22	5.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0068321	-	20827	XM_006539221	MGP_NODShiLtJ_P0068321	558 (aa)	XP_006539284	A2AW40
MGP_NODShiLtJ_T0068322	-	859	-	MGP_NODShiLtJ_P0068322	103 (aa)	-	-
MGP_NODShiLtJ_T0068323	-	576	-	MGP_NODShiLtJ_P0068323	72 (aa)	-	-
MGP_NODShiLtJ_T0068324	-	980	-	MGP_NODShiLtJ_P0068324	270 (aa)	-	-
MGP_NODShiLtJ_T0068325	-	292	-	MGP_NODShiLtJ_P0068325	73 (aa)	-	-
MGP_NODShiLtJ_T0068326	-	474	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0068327	-	3330	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0068328	-	1912	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0028769	Hnrnpr	54	57.823	MGP_NODShiLtJ_G0024868	A1cf	52	53.896
MGP_NODShiLtJ_G0028769	Hnrnpr	72	48.642	MGP_NODShiLtJ_G0029390	Rbm47	88	59.859
MGP_NODShiLtJ_G0028769	Hnrnpr	59	56.329	MGP_NODShiLtJ_G0027144	Rbm46	65	56.774
MGP_NODShiLtJ_G0028769	Hnrnpr	57	37.908	MGP_NODShiLtJ_G0024118	Dnd1	62	33.040