EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0028853 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb17
Alias: AA589413|Lp-1|Miz1|Zfp100|Znf151|mZ13
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 23000 bases
Position: chr4:157705049-157728048
Accession: 107410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0068658	zf-C2H2	PF00096.26	2.8e-60	1	10
MGP_NODShiLtJ_P0068658	zf-C2H2	PF00096.26	2.8e-60	2	10
MGP_NODShiLtJ_P0068658	zf-C2H2	PF00096.26	2.8e-60	3	10
MGP_NODShiLtJ_P0068658	zf-C2H2	PF00096.26	2.8e-60	4	10
MGP_NODShiLtJ_P0068658	zf-C2H2	PF00096.26	2.8e-60	5	10
MGP_NODShiLtJ_P0068658	zf-C2H2	PF00096.26	2.8e-60	6	10
MGP_NODShiLtJ_P0068658	zf-C2H2	PF00096.26	2.8e-60	7	10
MGP_NODShiLtJ_P0068658	zf-C2H2	PF00096.26	2.8e-60	8	10
MGP_NODShiLtJ_P0068658	zf-C2H2	PF00096.26	2.8e-60	9	10
MGP_NODShiLtJ_P0068658	zf-C2H2	PF00096.26	2.8e-60	10	10
MGP_NODShiLtJ_P0068658	zf-met	PF12874.7	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0068658	-	2722	XM_006538727	MGP_NODShiLtJ_P0068658	794 (aa)	XP_006538790	Q60821
MGP_NODShiLtJ_T0068659	-	3478	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0068664	-	867	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0068661	-	337	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0068660	-	2973	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0068663	-	771	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0068662	-	785	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0028853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0028853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0028853	Zbtb17	54	46.512	MGP_NODShiLtJ_G0033947	Zfp1	67	42.083
MGP_NODShiLtJ_G0028853	Zbtb17	79	46.354	MGP_NODShiLtJ_G0026936	Mynn	85	46.354
MGP_NODShiLtJ_G0028853	Zbtb17	58	41.141	MGP_NODShiLtJ_G0020540	Zfp759	86	41.141
MGP_NODShiLtJ_G0028853	Zbtb17	62	34.819	MGP_NODShiLtJ_G0033787	Zfp319	91	37.805
MGP_NODShiLtJ_G0028853	Zbtb17	55	43.322	MGP_NODShiLtJ_G0018107	Zfp454	65	42.424
MGP_NODShiLtJ_G0028853	Zbtb17	58	40.000	MGP_NODShiLtJ_G0032842	9130019O22Rik	67	40.000
MGP_NODShiLtJ_G0028853	Zbtb17	58	42.857	MGP_NODShiLtJ_G0032840	Zfp768	52	42.231
MGP_NODShiLtJ_G0028853	Zbtb17	71	39.891	MGP_NODShiLtJ_G0023070	Zfp945	93	39.233
MGP_NODShiLtJ_G0028853	Zbtb17	72	34.627	MGP_NODShiLtJ_G0023077	Zscan10	76	43.165
MGP_NODShiLtJ_G0028853	Zbtb17	56	41.518	MGP_NODShiLtJ_G0020128	Zkscan4	50	41.518
MGP_NODShiLtJ_G0028853	Zbtb17	58	40.968	MGP_NODShiLtJ_G0033575	Zfp882	85	42.985
MGP_NODShiLtJ_G0028853	Zbtb17	56	34.530	MGP_NODShiLtJ_G0026710	Zfp334	65	39.216
MGP_NODShiLtJ_G0028853	Zbtb17	62	50.909	MGP_NODShiLtJ_G0029310	Zbtb49	62	67.742
MGP_NODShiLtJ_G0028853	Zbtb17	61	40.576	MGP_NODShiLtJ_G0034217	Zfp26	79	43.413
MGP_NODShiLtJ_G0028853	Zbtb17	58	38.614	MGP_NODShiLtJ_G0030504	Repin1	93	38.614
MGP_NODShiLtJ_G0028853	Zbtb17	61	42.727	MGP_NODShiLtJ_G0024432	Zfp236	61	41.964
MGP_NODShiLtJ_G0028853	Zbtb17	59	32.021	MGP_NODShiLtJ_G0031667	Zfp574	71	38.532
MGP_NODShiLtJ_G0028853	Zbtb17	79	32.955	MGP_NODShiLtJ_G0020812	Zfp131	73	31.183
MGP_NODShiLtJ_G0028853	Zbtb17	78	39.568	MGP_NODShiLtJ_G0026427	Gzf1	83	37.118
MGP_NODShiLtJ_G0028853	Zbtb17	69	44.706	MGP_NODShiLtJ_G0031804	Zfp420	97	44.706
MGP_NODShiLtJ_G0028853	Zbtb17	63	42.606	MGP_NODShiLtJ_G0023050	Zfp51	82	42.183
MGP_NODShiLtJ_G0028853	Zbtb17	58	42.857	MGP_NODShiLtJ_G0031938	Zfp715	89	43.636
MGP_NODShiLtJ_G0028853	Zbtb17	61	43.636	MGP_NODShiLtJ_G0031629	Zfp112	59	43.636
MGP_NODShiLtJ_G0028853	Zbtb17	56	41.606	MGP_NODShiLtJ_G0020539	Rslcan18	66	41.600
MGP_NODShiLtJ_G0028853	Zbtb17	59	36.986	MGP_NODShiLtJ_G0018202	Zfp672	90	40.000
MGP_NODShiLtJ_G0028853	Zbtb17	55	41.083	MGP_NODShiLtJ_G0018250	Zfp867	81	41.083
MGP_NODShiLtJ_G0028853	Zbtb17	56	40.741	MGP_NODShiLtJ_G0031387	Zfp865	78	35.743
MGP_NODShiLtJ_G0028853	Zbtb17	83	42.308	MGP_NODShiLtJ_G0020555	Zfp748	92	45.322
MGP_NODShiLtJ_G0028853	Zbtb17	64	42.899	MGP_NODShiLtJ_G0023048	Zfp677	83	42.899
MGP_NODShiLtJ_G0028853	Zbtb17	62	43.182	MGP_NODShiLtJ_G0031630	Zfp235	71	44.248
MGP_NODShiLtJ_G0028853	Zbtb17	56	44.207	MGP_NODShiLtJ_G0031634	Zfp108	66	44.207
MGP_NODShiLtJ_G0028853	Zbtb17	56	44.086	MGP_NODShiLtJ_G0031637	Zfp94	76	44.086