EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0028985 (Gene tree)
Gene ID: -
Gene Symbol: Chd5
Alias: 4930532L22Rik|AW060752|B230399N07Rik|CHD-5|Kiaa0444
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 54691 bases
Position: chr4:169907433-169962123
Accession: 3036258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0069215	ResIII	PF04851.15	2.4e-07	1	1
MGP_NODShiLtJ_P0069217	ResIII	PF04851.15	2.5e-07	1	1
MGP_NODShiLtJ_P0069216	ResIII	PF04851.15	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0069219	-	6245	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0069218	-	280	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0069217	-	9122	-	MGP_NODShiLtJ_P0069217	1946 (aa)	-	-
MGP_NODShiLtJ_T0069216	-	9474	-	MGP_NODShiLtJ_P0069216	1952 (aa)	-	-
MGP_NODShiLtJ_T0069215	-	9363	XM_006538929	MGP_NODShiLtJ_P0069215	1915 (aa)	XP_006538992	A2A8L1

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0028985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0028985	Chd5	97	70.305	MGP_NODShiLtJ_G0018377	Chd3	95	71.106
MGP_NODShiLtJ_G0028985	Chd5	51	34.657	MGP_NODShiLtJ_G0026630	Chd6	66	36.621
MGP_NODShiLtJ_G0028985	Chd5	91	73.014	MGP_NODShiLtJ_G0031091	Chd4	96	72.343