EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0029039 (Gene tree)
Gene ID: -
Gene Symbol: Cpsf3l
Alias: 2410006F12Rik|AU044035|Ints11
Full Name: cleavage and polyadenylation specific factor 3-like
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 20028 bases
Position: chr4:173745470-173765497
Accession: 1919207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0069520	Beta-Casp	PF10996.8	1e-25	1	1
MGP_NODShiLtJ_P0069519	Beta-Casp	PF10996.8	1.1e-25	1	1
MGP_NODShiLtJ_P0069519	Lactamase_B	PF00753.27	1.7e-10	1	1
MGP_NODShiLtJ_P0069520	Lactamase_B	PF00753.27	9e-10	1	1
MGP_NODShiLtJ_P0069520	RMMBL	PF07521.12	1e-16	1	1
MGP_NODShiLtJ_P0069519	RMMBL	PF07521.12	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0069521	-	349	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0069520	-	1884	-	MGP_NODShiLtJ_P0069520	578 (aa)	-	-
MGP_NODShiLtJ_T0069523	-	475	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0069522	-	880	-	MGP_NODShiLtJ_P0069522	94 (aa)	-	-
MGP_NODShiLtJ_T0069518	-	2199	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0069519	-	2368	-	MGP_NODShiLtJ_P0069519	600 (aa)	-	-
MGP_NODShiLtJ_T0069525	-	517	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0029039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0029039	Cpsf3l	82	37.945	MGP_NODShiLtJ_G0019482	Cpsf3	71	37.945