EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0029310 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb49
Alias: 4930518A03Rik|Zfp509|Znf509
Full Name: zinc finger and BTB domain containing 49
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 30723 bases
Position: chr5:40162222-40192944
Accession: 1922329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0071097	zf-C2H2	PF00096.26	1.7e-35	1	7
MGP_NODShiLtJ_P0071097	zf-C2H2	PF00096.26	1.7e-35	2	7
MGP_NODShiLtJ_P0071097	zf-C2H2	PF00096.26	1.7e-35	3	7
MGP_NODShiLtJ_P0071097	zf-C2H2	PF00096.26	1.7e-35	4	7
MGP_NODShiLtJ_P0071097	zf-C2H2	PF00096.26	1.7e-35	5	7
MGP_NODShiLtJ_P0071097	zf-C2H2	PF00096.26	1.7e-35	6	7
MGP_NODShiLtJ_P0071097	zf-C2H2	PF00096.26	1.7e-35	7	7
MGP_NODShiLtJ_P0071102	zf-C2H2	PF00096.26	1.7e-09	1	2
MGP_NODShiLtJ_P0071102	zf-C2H2	PF00096.26	1.7e-09	2	2
MGP_NODShiLtJ_P0071105	zf-C2H2	PF00096.26	8e-06	1	1
MGP_NODShiLtJ_P0071097	zf-met	PF12874.7	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0071096	-	2868	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0071097	-	2978	-	MGP_NODShiLtJ_P0071097	756 (aa)	-	-
MGP_NODShiLtJ_T0071098	-	2721	-	MGP_NODShiLtJ_P0071098	428 (aa)	-	-
MGP_NODShiLtJ_T0071099	-	1654	-	MGP_NODShiLtJ_P0071099	110 (aa)	-	-
MGP_NODShiLtJ_T0071102	-	463	-	MGP_NODShiLtJ_P0071102	120 (aa)	-	-
MGP_NODShiLtJ_T0071103	-	688	-	MGP_NODShiLtJ_P0071103	95 (aa)	-	-
MGP_NODShiLtJ_T0071100	-	2271	-	MGP_NODShiLtJ_P0071100	444 (aa)	-	-
MGP_NODShiLtJ_T0071101	-	2028	-	MGP_NODShiLtJ_P0071101	65 (aa)	-	-
MGP_NODShiLtJ_T0071106	-	1337	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0071104	-	420	-	MGP_NODShiLtJ_P0071104	51 (aa)	-	-
MGP_NODShiLtJ_T0071105	-	2645	-	MGP_NODShiLtJ_P0071105	480 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0029310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0029310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0029310	Zbtb49	96	45.070	MGP_NODShiLtJ_G0030639	Prdm5	79	40.244
MGP_NODShiLtJ_G0029310	Zbtb49	78	45.833	MGP_NODShiLtJ_G0030984	Zfp637	78	46.061
MGP_NODShiLtJ_G0029310	Zbtb49	59	49.296	MGP_NODShiLtJ_G0031634	Zfp108	66	48.077
MGP_NODShiLtJ_G0029310	Zbtb49	74	47.297	MGP_NODShiLtJ_G0031636	Zfp61	53	47.938
MGP_NODShiLtJ_G0029310	Zbtb49	82	50.000	MGP_NODShiLtJ_G0031637	Zfp94	76	48.454
MGP_NODShiLtJ_G0029310	Zbtb49	61	50.704	MGP_NODShiLtJ_G0031630	Zfp235	63	50.000
MGP_NODShiLtJ_G0029310	Zbtb49	75	45.833	MGP_NODShiLtJ_G0020540	Zfp759	90	45.503
MGP_NODShiLtJ_G0029310	Zbtb49	66	47.222	MGP_NODShiLtJ_G0020128	Zkscan4	51	45.342
MGP_NODShiLtJ_G0029310	Zbtb49	62	46.479	MGP_NODShiLtJ_G0026427	Gzf1	59	44.103
MGP_NODShiLtJ_G0029310	Zbtb49	60	45.588	MGP_NODShiLtJ_G0023056	Gm10226	100	47.561
MGP_NODShiLtJ_G0029310	Zbtb49	78	48.611	MGP_NODShiLtJ_G0023050	Zfp51	81	45.361
MGP_NODShiLtJ_G0029310	Zbtb49	68	46.032	MGP_NODShiLtJ_G0026280	Zfp661	60	44.845
MGP_NODShiLtJ_G0029310	Zbtb49	62	45.205	MGP_NODShiLtJ_G0018837	Zfp652	57	42.593
MGP_NODShiLtJ_G0029310	Zbtb49	78	47.143	MGP_NODShiLtJ_G0018202	Zfp672	96	48.214
MGP_NODShiLtJ_G0029310	Zbtb49	63	50.000	MGP_NODShiLtJ_G0018107	Zfp454	65	47.423
MGP_NODShiLtJ_G0029310	Zbtb49	90	50.704	MGP_NODShiLtJ_G0026936	Mynn	85	45.128
MGP_NODShiLtJ_G0029310	Zbtb49	85	47.826	MGP_NODShiLtJ_G0020555	Zfp748	94	48.187
MGP_NODShiLtJ_G0029310	Zbtb49	69	47.887	MGP_NODShiLtJ_G0034217	Zfp26	80	47.668
MGP_NODShiLtJ_G0029310	Zbtb49	76	48.611	MGP_NODShiLtJ_G0033947	Zfp1	63	49.485
MGP_NODShiLtJ_G0029310	Zbtb49	95	48.611	MGP_NODShiLtJ_G0021849	Zfp251	69	49.741
MGP_NODShiLtJ_G0029310	Zbtb49	62	43.836	MGP_NODShiLtJ_G0035247	Zfp651	71	43.519
MGP_NODShiLtJ_G0029310	Zbtb49	77	45.833	MGP_NODShiLtJ_G0023070	Zfp945	77	43.814
MGP_NODShiLtJ_G0029310	Zbtb49	62	50.704	MGP_NODShiLtJ_G0023077	Zscan10	77	47.701
MGP_NODShiLtJ_G0029310	Zbtb49	74	50.000	MGP_NODShiLtJ_G0031667	Zfp574	60	43.651
MGP_NODShiLtJ_G0029310	Zbtb49	60	47.222	MGP_NODShiLtJ_G0030504	Repin1	95	38.889
MGP_NODShiLtJ_G0029310	Zbtb49	62	67.742	MGP_NODShiLtJ_G0028853	Zbtb17	62	50.909
MGP_NODShiLtJ_G0029310	Zbtb49	94	45.833	MGP_NODShiLtJ_G0026710	Zfp334	65	47.436
MGP_NODShiLtJ_G0029310	Zbtb49	78	44.872	MGP_NODShiLtJ_G0018250	Zfp867	84	48.187
MGP_NODShiLtJ_G0029310	Zbtb49	63	55.882	MGP_NODShiLtJ_G0031379	Zfp628	53	41.949
MGP_NODShiLtJ_G0029310	Zbtb49	60	47.619	MGP_NODShiLtJ_G0023818	Zbtb14	66	46.000
MGP_NODShiLtJ_G0029310	Zbtb49	66	45.455	MGP_NODShiLtJ_G0032842	9130019O22Rik	78	41.451
MGP_NODShiLtJ_G0029310	Zbtb49	64	47.945	MGP_NODShiLtJ_G0032843	-	62	45.000
MGP_NODShiLtJ_G0029310	Zbtb49	76	50.000	MGP_NODShiLtJ_G0032840	Zfp768	51	48.810
MGP_NODShiLtJ_G0029310	Zbtb49	64	47.945	MGP_NODShiLtJ_G0032844	E430018J23Rik	62	45.000
MGP_NODShiLtJ_G0029310	Zbtb49	85	45.714	MGP_NODShiLtJ_G0033575	Zfp882	85	46.114
MGP_NODShiLtJ_G0029310	Zbtb49	73	49.275	MGP_NODShiLtJ_G0031938	Zfp715	62	45.026
MGP_NODShiLtJ_G0029310	Zbtb49	62	47.887	MGP_NODShiLtJ_G0016424	Zbtb41	71	41.279
MGP_NODShiLtJ_G0029310	Zbtb49	62	47.887	MGP_NODShiLtJ_G0024432	Zfp236	61	43.925
MGP_NODShiLtJ_G0029310	Zbtb49	89	50.000	MGP_NODShiLtJ_G0031804	Zfp420	98	48.744
MGP_NODShiLtJ_G0029310	Zbtb49	64	48.052	MGP_NODShiLtJ_G0020539	Rslcan18	64	48.503
MGP_NODShiLtJ_G0029310	Zbtb49	78	46.479	MGP_NODShiLtJ_G0023048	Zfp677	79	46.500