EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NODShiLtJ_G0029390 (Gene tree)
Gene ID
-
Gene Symbol
Rbm47
Alias
9530077J19Rik
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Mus_musculus_nodshiltj
Status
putative
Strand
Minus strand
Length
164805 bases
Position
chr5:73494645-73659449
Accession
2384294
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NODShiLtJ_P0071562RRM_1PF00076.223.6e-3713
MGP_NODShiLtJ_P0071562RRM_1PF00076.223.6e-3723
MGP_NODShiLtJ_P0071562RRM_1PF00076.223.6e-3733
MGP_NODShiLtJ_P0071558RRM_1PF00076.225.7e-3713
MGP_NODShiLtJ_P0071558RRM_1PF00076.225.7e-3723
MGP_NODShiLtJ_P0071558RRM_1PF00076.225.7e-3733
MGP_NODShiLtJ_P0071559RRM_1PF00076.225.7e-3713
MGP_NODShiLtJ_P0071559RRM_1PF00076.225.7e-3723
MGP_NODShiLtJ_P0071559RRM_1PF00076.225.7e-3733
MGP_NODShiLtJ_P0071560RRM_1PF00076.225.7e-3713
MGP_NODShiLtJ_P0071560RRM_1PF00076.225.7e-3723
MGP_NODShiLtJ_P0071560RRM_1PF00076.225.7e-3733
MGP_NODShiLtJ_P0071561RRM_1PF00076.225.7e-3713
MGP_NODShiLtJ_P0071561RRM_1PF00076.225.7e-3723
MGP_NODShiLtJ_P0071561RRM_1PF00076.225.7e-3733
MGP_NODShiLtJ_P0071563RRM_1PF00076.225.7e-3713
MGP_NODShiLtJ_P0071563RRM_1PF00076.225.7e-3723
MGP_NODShiLtJ_P0071563RRM_1PF00076.225.7e-3733
MGP_NODShiLtJ_P0071564RRM_1PF00076.225.7e-3713
MGP_NODShiLtJ_P0071564RRM_1PF00076.225.7e-3723
MGP_NODShiLtJ_P0071564RRM_1PF00076.225.7e-3733
MGP_NODShiLtJ_P0071566RRM_1PF00076.222.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NODShiLtJ_T0071564-2182-MGP_NODShiLtJ_P0071564590 (aa)--
MGP_NODShiLtJ_T0071565-2363--- (aa)--
MGP_NODShiLtJ_T0071566-703-MGP_NODShiLtJ_P0071566158 (aa)--
MGP_NODShiLtJ_T0071567-504--- (aa)--
MGP_NODShiLtJ_T0071560-4570-MGP_NODShiLtJ_P0071560590 (aa)--
MGP_NODShiLtJ_T0071561-4823-MGP_NODShiLtJ_P0071561590 (aa)--
MGP_NODShiLtJ_T0071562-2955-MGP_NODShiLtJ_P0071562521 (aa)--
MGP_NODShiLtJ_T0071563-3162-MGP_NODShiLtJ_P0071563590 (aa)--
MGP_NODShiLtJ_T0071568-332-MGP_NODShiLtJ_P007156813 (aa)--
MGP_NODShiLtJ_T0071569-529-MGP_NODShiLtJ_P00715696 (aa)--
MGP_NODShiLtJ_T0071559-5139-MGP_NODShiLtJ_P0071559590 (aa)--
MGP_NODShiLtJ_T0071558-4630XM_006503956MGP_NODShiLtJ_P0071558590 (aa)XP_006504019Q91WT8
MGP_NODShiLtJ_T0071570-453--- (aa)--
MGP_NODShiLtJ_T0071571-465--- (aa)--
Gene Model
Click here to download MGP_NODShiLtJ_G0029390's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0029390's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NODShiLtJ_G0029390Rbm479473.649MGP_NODShiLtJ_G0027144Rbm466672.468
MGP_NODShiLtJ_G0029390Rbm478967.376MGP_NODShiLtJ_G0024868A1cf7557.816
MGP_NODShiLtJ_G0029390Rbm478150.781MGP_NODShiLtJ_G0024118Dnd15841.748
MGP_NODShiLtJ_G0029390Rbm478859.859MGP_NODShiLtJ_G0028769Hnrnpr7248.642

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