EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0029512 (Gene tree)
Gene ID: -
Gene Symbol: Grsf1
Alias: BB232551|C80280|D5Wsu31e
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 20128 bases
Position: chr5:101443306-101463433
Accession: 106479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0072139	RRM_1	PF00076.22	2.4e-23	1	1
MGP_NODShiLtJ_P0072140	RRM_1	PF00076.22	8.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0072139	-	4361	-	MGP_NODShiLtJ_P0072139	362 (aa)	-	Q8C5Q4
MGP_NODShiLtJ_T0072142	-	321	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0072141	-	899	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0072140	-	2538	-	MGP_NODShiLtJ_P0072140	479 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0029512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0029512's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0029512	Grsf1	92	48.705	MGP_NODShiLtJ_G0035851	-	94	48.705
MGP_NODShiLtJ_G0029512	Grsf1	70	67.532	MGP_NODShiLtJ_G0017170	Hnrnph3	58	67.089
MGP_NODShiLtJ_G0029512	Grsf1	92	65.333	MGP_NODShiLtJ_G0018101	Hnrnph1	60	64.474