EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0029559 (Gene tree)
Gene ID: -
Gene Symbol: Sept11
Alias: 6230410I01Rik|AW548875|D5Ertd606e
Full Name: septin 11
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 85274 bases
Position: chr5:106346516-106431789
Accession: 1277214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0072341	MMR_HSR1	PF01926.23	6.8e-07	1	1
MGP_NODShiLtJ_P0072339	MMR_HSR1	PF01926.23	2.1e-06	1	1
MGP_NODShiLtJ_P0072337	MMR_HSR1	PF01926.23	2.1e-06	1	1
MGP_NODShiLtJ_P0072342	MMR_HSR1	PF01926.23	2.2e-06	1	1
MGP_NODShiLtJ_P0072344	MMR_HSR1	PF01926.23	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0072338	-	640	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0072339	-	3496	-	MGP_NODShiLtJ_P0072339	425 (aa)	-	-
MGP_NODShiLtJ_T0072337	-	5028	XM_006535104	MGP_NODShiLtJ_P0072337	429 (aa)	XP_006535161	Q8C1B7
MGP_NODShiLtJ_T0072345	-	1119	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0072344	-	1380	-	MGP_NODShiLtJ_P0072344	432 (aa)	-	-
MGP_NODShiLtJ_T0072341	-	1792	-	MGP_NODShiLtJ_P0072341	425 (aa)	-	-
MGP_NODShiLtJ_T0072340	-	1066	-	MGP_NODShiLtJ_P0072340	204 (aa)	-	-
MGP_NODShiLtJ_T0072343	-	434	-	MGP_NODShiLtJ_P0072343	97 (aa)	-	-
MGP_NODShiLtJ_T0072342	-	2427	-	MGP_NODShiLtJ_P0072342	431 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0029559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0029559's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0029559	Sept11	96	41.093	MGP_NODShiLtJ_G0034296	Sept7	78	42.690
MGP_NODShiLtJ_G0029559	Sept11	76	40.762	MGP_NODShiLtJ_G0032834	Sept1	100	40.816
MGP_NODShiLtJ_G0029559	Sept11	69	43.234	MGP_NODShiLtJ_G0016212	Sept2	100	42.202
MGP_NODShiLtJ_G0029559	Sept11	67	43.878	MGP_NODShiLtJ_G0018755	Sept4	93	43.878
MGP_NODShiLtJ_G0029559	Sept11	69	44.000	MGP_NODShiLtJ_G0021968	Sept3	89	44.000
MGP_NODShiLtJ_G0029559	Sept11	99	79.157	MGP_NODShiLtJ_G0018150	Sept8	88	81.915
MGP_NODShiLtJ_G0029559	Sept11	98	72.530	MGP_NODShiLtJ_G0017113	Sept10	85	76.438
MGP_NODShiLtJ_G0029559	Sept11	100	82.201	MGP_NODShiLtJ_G0035427	Sept6	100	82.028
MGP_NODShiLtJ_G0029559	Sept11	60	38.077	MGP_NODShiLtJ_G0022310	Sept12	82	37.931
MGP_NODShiLtJ_G0029559	Sept11	67	42.953	MGP_NODShiLtJ_G0019303	Sept9	81	46.970
MGP_NODShiLtJ_G0029559	Sept11	76	41.493	MGP_NODShiLtJ_G0022447	Sept5	90	40.828