EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0029645 (Gene tree)
Gene ID: -
Gene Symbol: Gfi1
Alias: AW495828|Gfi-1|Pal-1|Pal1
Full Name: growth factor independent 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 10471 bases
Position: chr5:123002892-123013362
Accession: 103170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0072729	zf-C2H2	PF00096.26	5e-28	1	6
MGP_NODShiLtJ_P0072729	zf-C2H2	PF00096.26	5e-28	2	6
MGP_NODShiLtJ_P0072729	zf-C2H2	PF00096.26	5e-28	3	6
MGP_NODShiLtJ_P0072729	zf-C2H2	PF00096.26	5e-28	4	6
MGP_NODShiLtJ_P0072729	zf-C2H2	PF00096.26	5e-28	5	6
MGP_NODShiLtJ_P0072729	zf-C2H2	PF00096.26	5e-28	6	6
MGP_NODShiLtJ_P0072728	zf-C2H2	PF00096.26	1.5e-27	1	6
MGP_NODShiLtJ_P0072728	zf-C2H2	PF00096.26	1.5e-27	2	6
MGP_NODShiLtJ_P0072728	zf-C2H2	PF00096.26	1.5e-27	3	6
MGP_NODShiLtJ_P0072728	zf-C2H2	PF00096.26	1.5e-27	4	6
MGP_NODShiLtJ_P0072728	zf-C2H2	PF00096.26	1.5e-27	5	6
MGP_NODShiLtJ_P0072728	zf-C2H2	PF00096.26	1.5e-27	6	6
MGP_NODShiLtJ_P0072729	zf-met	PF12874.7	2.5e-07	1	1
MGP_NODShiLtJ_P0072728	zf-met	PF12874.7	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0072730	-	689	-	MGP_NODShiLtJ_P0072730	186 (aa)	-	-
MGP_NODShiLtJ_T0072729	-	1272	-	MGP_NODShiLtJ_P0072729	423 (aa)	-	-
MGP_NODShiLtJ_T0072728	-	2639	XM_006534791	MGP_NODShiLtJ_P0072728	489 (aa)	XP_006534854	A0A0R4J292

Gene Model

Click here to download MGP_NODShiLtJ_G0029645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0029645's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0029645	Gfi1	57	47.337	MGP_NODShiLtJ_G0020555	Zfp748	93	47.337
MGP_NODShiLtJ_G0029645	Gfi1	52	41.212	MGP_NODShiLtJ_G0032842	9130019O22Rik	71	41.212
MGP_NODShiLtJ_G0029645	Gfi1	51	42.771	MGP_NODShiLtJ_G0023077	Zscan10	85	42.771
MGP_NODShiLtJ_G0029645	Gfi1	60	47.024	MGP_NODShiLtJ_G0021849	Zfp251	67	47.024
MGP_NODShiLtJ_G0029645	Gfi1	51	48.276	MGP_NODShiLtJ_G0018202	Zfp672	90	48.276