EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0029765 (Gene tree)
Gene ID: -
Gene Symbol: Srsf9
Alias: 25kDa|2610029M16Rik|SRp30c|Sfrs9
Full Name: serine/arginine-rich splicing factor 9
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 7042 bases
Position: chr5:131772055-131779096
Accession: 104896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0073313	RRM_1	PF00076.22	4.9e-33	1	2
MGP_NODShiLtJ_P0073313	RRM_1	PF00076.22	4.9e-33	2	2
MGP_NODShiLtJ_P0073316	RRM_1	PF00076.22	9.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0073313	-	1216	XM_011248158	MGP_NODShiLtJ_P0073313	240 (aa)	XP_011246460	Q9D0B0
MGP_NODShiLtJ_T0073315	-	474	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0073314	-	901	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0073316	-	767	-	MGP_NODShiLtJ_P0073316	158 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0029765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0029765's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0029765	Srsf9	63	39.394	MGP_NODShiLtJ_G0019749	Srsf5	89	48.780
MGP_NODShiLtJ_G0029765	Srsf9	73	70.330	MGP_NODShiLtJ_G0018769	Srsf1	79	79.762
MGP_NODShiLtJ_G0029765	Srsf9	65	38.674	MGP_NODShiLtJ_G0026633	Srsf6	51	47.297