EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0029900 (Gene tree)
Gene ID: -
Gene Symbol: Ddx55
Alias: 2810021H22Rik|Kiaa1595|mKIAA1595
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 16453 bases
Position: chr5:142156166-142172618
Accession: 1915098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0074109	ResIII	PF04851.15	5.6e-07	1	1
MGP_NODShiLtJ_P0074109	DEAD	PF00270.29	1.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0074109	-	2790	-	MGP_NODShiLtJ_P0074109	618 (aa)	-	-
MGP_NODShiLtJ_T0074108	-	3516	-	MGP_NODShiLtJ_P0074108	135 (aa)	-	Q6ZPL9
MGP_NODShiLtJ_T0074112	-	1430	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0074113	-	824	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0074110	-	445	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0074111	-	477	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0029900's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0029900's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0029900	Ddx55	56	33.056	MGP_NODShiLtJ_G0033504	Ddx49	92	33.238
MGP_NODShiLtJ_G0029900	Ddx55	57	35.200	MGP_NODShiLtJ_G0035370	Ddx3x	54	35.106
MGP_NODShiLtJ_G0029900	Ddx55	56	31.429	MGP_NODShiLtJ_G0016413	Ddx59	54	31.429
MGP_NODShiLtJ_G0029900	Ddx55	58	32.044	MGP_NODShiLtJ_G0034865	Ddx43	53	32.044
MGP_NODShiLtJ_G0029900	Ddx55	61	31.234	MGP_NODShiLtJ_G0034513	Ddx6	74	31.234
MGP_NODShiLtJ_G0029900	Ddx55	57	32.687	MGP_NODShiLtJ_G0021907	Ddx17	53	32.687
MGP_NODShiLtJ_G0029900	Ddx55	57	35.977	MGP_NODShiLtJ_G0031223	Ddx47	81	35.977
MGP_NODShiLtJ_G0029900	Ddx55	57	35.635	MGP_NODShiLtJ_G0020442	Ddx41	55	35.440
MGP_NODShiLtJ_G0029900	Ddx55	57	35.733	MGP_NODShiLtJ_G0016790	D1Pas1	54	35.733
MGP_NODShiLtJ_G0029900	Ddx55	58	30.886	MGP_NODShiLtJ_G0033877	Ddx28	69	30.886
MGP_NODShiLtJ_G0029900	Ddx55	72	31.528	MGP_NODShiLtJ_G0025371	Ddx31	74	31.528
MGP_NODShiLtJ_G0029900	Ddx55	57	30.362	MGP_NODShiLtJ_G0022507	Eif4a2	93	30.362
MGP_NODShiLtJ_G0029900	Ddx55	58	30.769	MGP_NODShiLtJ_G0018394	Eif4a1	96	30.193
MGP_NODShiLtJ_G0029900	Ddx55	56	30.618	MGP_NODShiLtJ_G0019166	Ddx5	66	30.618
MGP_NODShiLtJ_G0029900	Ddx55	61	30.750	MGP_NODShiLtJ_G0018712	Ddx52	62	30.750
MGP_NODShiLtJ_G0029900	Ddx55	73	38.190	MGP_NODShiLtJ_G0034605	Ddx10	50	38.190
MGP_NODShiLtJ_G0029900	Ddx55	75	36.188	MGP_NODShiLtJ_G0016284	Ddx18	59	36.188