EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0030316 (Gene tree)
Gene ID: -
Gene Symbol: Arf5
Alias: -
Full Name: ADP-ribosylation factor 5
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 3104 bases
Position: chr6:30470011-30473114
Accession: 99434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0076213	MMR_HSR1	PF01926.23	6.1e-05	1	1
MGP_NODShiLtJ_P0076214	MMR_HSR1	PF01926.23	6.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0076213	-	1116	-	MGP_NODShiLtJ_P0076213	180 (aa)	-	P84084
MGP_NODShiLtJ_T0076215	-	919	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0076214	-	830	-	MGP_NODShiLtJ_P0076214	180 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0030316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0030316's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0030316	Arf5	96	42.197	MGP_NODShiLtJ_G0018896	Arl5c	96	42.197
MGP_NODShiLtJ_G0030316	Arf5	91	36.527	MGP_NODShiLtJ_G0022760	Arl6	90	36.527
MGP_NODShiLtJ_G0030316	Arf5	90	45.455	MGP_NODShiLtJ_G0027109	Arl14	86	45.455
MGP_NODShiLtJ_G0030316	Arf5	97	42.541	MGP_NODShiLtJ_G0019557	Arl4a	91	42.541
MGP_NODShiLtJ_G0030316	Arf5	95	46.328	MGP_NODShiLtJ_G0016157	Arl4c	92	46.328
MGP_NODShiLtJ_G0030316	Arf5	92	41.317	MGP_NODShiLtJ_G0021278	Arl11	95	41.317
MGP_NODShiLtJ_G0030316	Arf5	100	44.444	MGP_NODShiLtJ_G0025204	Arl5b	99	44.444
MGP_NODShiLtJ_G0030316	Arf5	96	31.609	MGP_NODShiLtJ_G0030909	Arl8b	94	31.609
MGP_NODShiLtJ_G0030316	Arf5	87	60.510	MGP_NODShiLtJ_G0017494	Arl1	95	59.302
MGP_NODShiLtJ_G0030316	Arf5	100	78.889	MGP_NODShiLtJ_G0022137	Arf3	99	78.889
MGP_NODShiLtJ_G0030316	Arf5	70	35.938	MGP_NODShiLtJ_G0020411	Arl10	62	35.938
MGP_NODShiLtJ_G0030316	Arf5	94	34.225	MGP_NODShiLtJ_G0026836	Arfrp1	90	38.393
MGP_NODShiLtJ_G0030316	Arf5	100	40.323	MGP_NODShiLtJ_G0019063	Arl4d	91	40.323
MGP_NODShiLtJ_G0030316	Arf5	100	45.556	MGP_NODShiLtJ_G0025570	Arl5a	100	45.556
MGP_NODShiLtJ_G0030316	Arf5	92	46.386	MGP_NODShiLtJ_G0024579	Arl2	90	46.386
MGP_NODShiLtJ_G0030316	Arf5	92	44.242	MGP_NODShiLtJ_G0025046	Arl3	91	44.242
MGP_NODShiLtJ_G0030316	Arf5	100	80.000	MGP_NODShiLtJ_G0019124	Arf2	99	80.000
MGP_NODShiLtJ_G0030316	Arf5	96	30.460	MGP_NODShiLtJ_G0016389	Arl8a	94	30.460