EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0030538 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa2b1
Alias: 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A
Full Name: heterogeneous nuclear ribonucleoprotein A2/B1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 9214 bases
Position: chr6:56599423-56608636
Accession: 104819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0077167	RRM_1	PF00076.22	3.3e-32	1	2
MGP_NODShiLtJ_P0077167	RRM_1	PF00076.22	3.3e-32	2	2
MGP_NODShiLtJ_P0077173	RRM_1	PF00076.22	3.3e-32	1	2
MGP_NODShiLtJ_P0077173	RRM_1	PF00076.22	3.3e-32	2	2
MGP_NODShiLtJ_P0077170	RRM_1	PF00076.22	4.9e-32	1	2
MGP_NODShiLtJ_P0077170	RRM_1	PF00076.22	4.9e-32	2	2
MGP_NODShiLtJ_P0077174	RRM_1	PF00076.22	4.9e-32	1	2
MGP_NODShiLtJ_P0077174	RRM_1	PF00076.22	4.9e-32	2	2
MGP_NODShiLtJ_P0077172	RRM_1	PF00076.22	5.5e-32	1	2
MGP_NODShiLtJ_P0077172	RRM_1	PF00076.22	5.5e-32	2	2
MGP_NODShiLtJ_P0077176	RRM_1	PF00076.22	1.9e-15	1	1
MGP_NODShiLtJ_P0077176	HnRNPA1	PF11627.8	1.9e-16	1	1
MGP_NODShiLtJ_P0077167	HnRNPA1	PF11627.8	2.1e-06	1	1
MGP_NODShiLtJ_P0077173	HnRNPA1	PF11627.8	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0077175	-	766	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077167	-	1647	XM_006506373	MGP_NODShiLtJ_P0077167	301 (aa)	XP_006506436	O88569
MGP_NODShiLtJ_T0077177	-	730	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077176	-	466	-	MGP_NODShiLtJ_P0077176	154 (aa)	-	-
MGP_NODShiLtJ_T0077171	-	1554	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077170	-	1662	-	MGP_NODShiLtJ_P0077170	341 (aa)	-	-
MGP_NODShiLtJ_T0077173	-	1518	-	MGP_NODShiLtJ_P0077173	301 (aa)	-	-
MGP_NODShiLtJ_T0077172	-	1728	-	MGP_NODShiLtJ_P0077172	353 (aa)	-	-
MGP_NODShiLtJ_T0077179	-	3650	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077178	-	620	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077168	-	1703	-	MGP_NODShiLtJ_P0077168	353 (aa)	-	-
MGP_NODShiLtJ_T0077169	-	1542	-	MGP_NODShiLtJ_P0077169	301 (aa)	-	-
MGP_NODShiLtJ_T0077174	-	1638	-	MGP_NODShiLtJ_P0077174	341 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0030538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0030538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0030538	Hnrnpa2b1	56	44.348	MGP_NODShiLtJ_G0018774	Msi2	100	44.348
MGP_NODShiLtJ_G0030538	Hnrnpa2b1	56	38.554	MGP_NODShiLtJ_G0035535	Rbmx	90	40.299
MGP_NODShiLtJ_G0030538	Hnrnpa2b1	69	31.776	MGP_NODShiLtJ_G0015900	Boll	64	37.500
MGP_NODShiLtJ_G0030538	Hnrnpa2b1	60	41.026	MGP_NODShiLtJ_G0017353	Dazap1	99	40.237
MGP_NODShiLtJ_G0030538	Hnrnpa2b1	50	44.737	MGP_NODShiLtJ_G0017347	Cirbp	70	44.737
MGP_NODShiLtJ_G0030538	Hnrnpa2b1	91	41.379	MGP_NODShiLtJ_G0029769	Msi1	61	43.750
MGP_NODShiLtJ_G0030538	Hnrnpa2b1	66	32.143	MGP_NODShiLtJ_G0034700	Celf6	79	31.250
MGP_NODShiLtJ_G0030538	Hnrnpa2b1	61	38.068	MGP_NODShiLtJ_G0018120	Hnrnpab	64	37.368
MGP_NODShiLtJ_G0030538	Hnrnpa2b1	91	55.970	MGP_NODShiLtJ_G0020684	Gm17190	73	58.113
MGP_NODShiLtJ_G0030538	Hnrnpa2b1	72	41.148	MGP_NODShiLtJ_G0029581	Hnrnpd	97	44.545
MGP_NODShiLtJ_G0030538	Hnrnpa2b1	58	38.824	MGP_NODShiLtJ_G0029583	Hnrnpdl	58	38.542
MGP_NODShiLtJ_G0030538	Hnrnpa2b1	66	30.348	MGP_NODShiLtJ_G0028933	Tardbp	94	30.282
MGP_NODShiLtJ_G0030538	Hnrnpa2b1	59	55.307	MGP_NODShiLtJ_G0020467	Hnrnpa0	91	49.640