EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0030652 (Gene tree)
Gene ID: -
Gene Symbol: Serbp1
Alias: 1200009K13Rik|9330147J08Rik|AL022786|Pairbp1
Full Name: serpine1 mRNA binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 81102 bases
Position: chr6:75365146-75446247
Accession: 1914120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0077565	HABP4_PAI-RBP1	PF04774.15	5e-34	1	1
MGP_NODShiLtJ_P0077568	HABP4_PAI-RBP1	PF04774.15	7.5e-32	1	1
MGP_NODShiLtJ_P0077564	HABP4_PAI-RBP1	PF04774.15	2.8e-31	1	1
MGP_NODShiLtJ_P0077570	HABP4_PAI-RBP1	PF04774.15	3.8e-29	1	1
MGP_NODShiLtJ_P0077576	HABP4_PAI-RBP1	PF04774.15	1.4e-15	1	1
MGP_NODShiLtJ_P0077567	HABP4_PAI-RBP1	PF04774.15	8.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0077576	-	558	-	MGP_NODShiLtJ_P0077576	185 (aa)	-	-
MGP_NODShiLtJ_T0077575	-	836	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077574	-	717	-	MGP_NODShiLtJ_P0077574	211 (aa)	-	-
MGP_NODShiLtJ_T0077578	-	665	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077568	-	1336	-	MGP_NODShiLtJ_P0077568	386 (aa)	-	-
MGP_NODShiLtJ_T0077569	-	1928	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077577	-	612	-	MGP_NODShiLtJ_P0077577	74 (aa)	-	-
MGP_NODShiLtJ_T0077570	-	1622	-	MGP_NODShiLtJ_P0077570	392 (aa)	-	-
MGP_NODShiLtJ_T0077571	-	1166	-	MGP_NODShiLtJ_P0077571	147 (aa)	-	-
MGP_NODShiLtJ_T0077563	-	397	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077573	-	600	-	MGP_NODShiLtJ_P0077573	155 (aa)	-	-
MGP_NODShiLtJ_T0077572	-	3163	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077566	-	2359	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077567	-	1293	-	MGP_NODShiLtJ_P0077567	362 (aa)	-	-
MGP_NODShiLtJ_T0077564	-	15070	-	MGP_NODShiLtJ_P0077564	407 (aa)	-	-
MGP_NODShiLtJ_T0077565	-	1672	-	MGP_NODShiLtJ_P0077565	401 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0030652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0030652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0030652	Serbp1	99	39.759	MGP_NODShiLtJ_G0020515	Habp4	96	39.312