EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0030674 (Gene tree)
Gene ID: -
Gene Symbol: Polr1a
Alias: 194kDa|3010014K16Rik|RPA194|Rpa1|Rpo1-4|mRPA1
Full Name: polymerase (RNA) I polypeptide A
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 73066 bases
Position: chr6:80764950-80838015
Accession: 1096397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0077664	RNA_pol_Rpb1_5	PF04998.17	6.5e-103	1	1
MGP_NODShiLtJ_P0077664	RNA_pol_Rpb1_4	PF05000.17	1.5e-25	1	1
MGP_NODShiLtJ_P0077664	RNA_pol_Rpb1_2	PF00623.20	3.5e-70	1	1
MGP_NODShiLtJ_P0077664	RNA_pol_Rpb1_3	PF04983.18	8.9e-37	1	1
MGP_NODShiLtJ_P0077664	RNA_pol_Rpb1_1	PF04997.12	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0077670	-	625	-	MGP_NODShiLtJ_P0077670	47 (aa)	-	-
MGP_NODShiLtJ_T0077669	-	584	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077668	-	351	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077665	-	1492	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077664	-	9229	-	MGP_NODShiLtJ_P0077664	1717 (aa)	-	-
MGP_NODShiLtJ_T0077667	-	358	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077666	-	3302	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0077672	-	4572	-	MGP_NODShiLtJ_P0077672	742 (aa)	-	-
MGP_NODShiLtJ_T0077663	-	3394	-	MGP_NODShiLtJ_P0077663	282 (aa)	-	O35134
MGP_NODShiLtJ_T0077671	-	560	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0030674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0030674's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0030674	Polr1a	73	33.333	MGP_NODShiLtJ_G0018399	Polr2a	51	37.143
MGP_NODShiLtJ_G0030674	Polr1a	67	33.238	MGP_NODShiLtJ_G0020897	Polr3a	71	33.157