EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0030699 (Gene tree)
Gene ID: -
Gene Symbol: Gm5580
Alias: -
Full Name: predicted pseudogene 5580
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 1446 bases
Position: chr6:88345428-88346873
Accession: 3646594
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0077798	DEAD	PF00270.29	1.3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0077798	-	1170	-	MGP_NODShiLtJ_P0077798	347 (aa)	-	A0A0N4SVP8

Gene Model

Click here to download MGP_NODShiLtJ_G0030699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0030699's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0030699	Gm5580	56	39.086	MGP_NODShiLtJ_G0033644	Ddx39	76	41.509
MGP_NODShiLtJ_G0030699	Gm5580	54	32.642	MGP_NODShiLtJ_G0033504	Ddx49	55	32.642
MGP_NODShiLtJ_G0030699	Gm5580	60	62.981	MGP_NODShiLtJ_G0018394	Eif4a1	50	62.981
MGP_NODShiLtJ_G0030699	Gm5580	79	100.000	MGP_NODShiLtJ_G0030700	Gm8994	95	90.948
MGP_NODShiLtJ_G0030699	Gm5580	56	38.579	MGP_NODShiLtJ_G0023455	Ddx39b	60	38.579
MGP_NODShiLtJ_G0030699	Gm5580	61	33.175	MGP_NODShiLtJ_G0031223	Ddx47	66	35.593
MGP_NODShiLtJ_G0030699	Gm5580	67	96.552	MGP_NODShiLtJ_G0019335	Eif4a3	71	87.500
MGP_NODShiLtJ_G0030699	Gm5580	54	32.642	MGP_NODShiLtJ_G0017875	Ddx56	75	32.642
MGP_NODShiLtJ_G0030699	Gm5580	60	64.423	MGP_NODShiLtJ_G0022507	Eif4a2	57	64.423