EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0030700 (Gene tree)
Gene ID: -
Gene Symbol: Gm8994
Alias: B020013A22Rik|EG668137
Full Name: predicted gene 8994
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 1540 bases
Position: chr6:88345429-88346968
Accession: 3644226
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0077799	DEAD	PF00270.29	1.3e-42	1	1
MGP_NODShiLtJ_P0077800	DEAD	PF00270.29	1.4e-31	1	2
MGP_NODShiLtJ_P0077800	DEAD	PF00270.29	1.4e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0077799	-	1264	-	MGP_NODShiLtJ_P0077799	347 (aa)	-	A0A0N4SVM5
MGP_NODShiLtJ_T0077800	-	677	-	MGP_NODShiLtJ_P0077800	221 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0030700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0030700's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0030700	Gm8994	89	57.339	MGP_NODShiLtJ_G0018394	Eif4a1	50	62.981
MGP_NODShiLtJ_G0030700	Gm8994	61	33.175	MGP_NODShiLtJ_G0031223	Ddx47	66	35.593
MGP_NODShiLtJ_G0030700	Gm8994	100	95.928	MGP_NODShiLtJ_G0019335	Eif4a3	74	95.928
MGP_NODShiLtJ_G0030700	Gm8994	81	30.208	MGP_NODShiLtJ_G0017875	Ddx56	81	30.102
MGP_NODShiLtJ_G0030700	Gm8994	95	90.948	MGP_NODShiLtJ_G0030699	Gm5580	79	100.000
MGP_NODShiLtJ_G0030700	Gm8994	54	32.642	MGP_NODShiLtJ_G0033504	Ddx49	55	32.642
MGP_NODShiLtJ_G0030700	Gm8994	82	34.951	MGP_NODShiLtJ_G0023455	Ddx39b	60	38.579
MGP_NODShiLtJ_G0030700	Gm8994	89	57.339	MGP_NODShiLtJ_G0022507	Eif4a2	57	64.423
MGP_NODShiLtJ_G0030700	Gm8994	82	34.951	MGP_NODShiLtJ_G0033644	Ddx39	76	41.509