EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0030810 (Gene tree)
Gene ID: -
Gene Symbol: Rab7
Alias: Rab7a
Full Name: RAB7%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 53135 bases
Position: chr6:99445215-99498349
Accession: 105068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0078352	MMR_HSR1	PF01926.23	7.1e-07	1	1
MGP_NODShiLtJ_P0078353	MMR_HSR1	PF01926.23	7.7e-07	1	1
MGP_NODShiLtJ_P0078354	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0078354	-	372	-	MGP_NODShiLtJ_P0078354	79 (aa)	-	-
MGP_NODShiLtJ_T0078352	-	1336	-	MGP_NODShiLtJ_P0078352	207 (aa)	-	P51150
MGP_NODShiLtJ_T0078353	-	550	-	MGP_NODShiLtJ_P0078353	98 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0030810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0030810's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0030810	Rab7	100	44.304	MGP_NODShiLtJ_G0019721	Rab15	81	33.520
MGP_NODShiLtJ_G0030810	Rab7	90	40.278	MGP_NODShiLtJ_G0035647	Rab39b	76	34.545
MGP_NODShiLtJ_G0030810	Rab7	90	49.296	MGP_NODShiLtJ_G0019020	Rab5c	77	42.442
MGP_NODShiLtJ_G0030810	Rab7	76	33.121	MGP_NODShiLtJ_G0031291	Kras	87	33.929
MGP_NODShiLtJ_G0030810	Rab7	90	49.296	MGP_NODShiLtJ_G0026777	Rab22a	82	40.854
MGP_NODShiLtJ_G0030810	Rab7	100	40.000	MGP_NODShiLtJ_G0027010	Rab33b	79	36.559
MGP_NODShiLtJ_G0030810	Rab7	90	49.296	MGP_NODShiLtJ_G0017738	Rab5b	78	42.442
MGP_NODShiLtJ_G0030810	Rab7	91	45.833	MGP_NODShiLtJ_G0023355	Rab11b	72	40.491
MGP_NODShiLtJ_G0030810	Rab7	91	45.833	MGP_NODShiLtJ_G0017209	Rab36	63	36.571
MGP_NODShiLtJ_G0030810	Rab7	79	31.169	MGP_NODShiLtJ_G0034970	Mras	80	33.333
MGP_NODShiLtJ_G0030810	Rab7	90	50.704	MGP_NODShiLtJ_G0023800	Rab31	82	44.512
MGP_NODShiLtJ_G0030810	Rab7	90	50.704	MGP_NODShiLtJ_G0023809	Rab12	64	36.316
MGP_NODShiLtJ_G0030810	Rab7	90	50.704	MGP_NODShiLtJ_G0032382	Rab6a	94	36.000
MGP_NODShiLtJ_G0030810	Rab7	91	40.449	MGP_NODShiLtJ_G0022069	Rabl2	71	33.735
MGP_NODShiLtJ_G0030810	Rab7	66	32.117	MGP_NODShiLtJ_G0033021	Hras	96	30.808
MGP_NODShiLtJ_G0030810	Rab7	91	45.833	MGP_NODShiLtJ_G0032323	Rab30	88	38.043
MGP_NODShiLtJ_G0030810	Rab7	95	53.947	MGP_NODShiLtJ_G0019228	Rab37	76	41.071
MGP_NODShiLtJ_G0030810	Rab7	99	47.436	MGP_NODShiLtJ_G0023711	Rab5a	81	40.782
MGP_NODShiLtJ_G0030810	Rab7	91	45.833	MGP_NODShiLtJ_G0025488	Rab14	83	40.310
MGP_NODShiLtJ_G0030810	Rab7	83	35.714	MGP_NODShiLtJ_G0019063	Arl4d	58	32.520
MGP_NODShiLtJ_G0030810	Rab7	100	39.241	MGP_NODShiLtJ_G0024523	Rab1b	97	34.848
MGP_NODShiLtJ_G0030810	Rab7	91	46.067	MGP_NODShiLtJ_G0021129	Rab2b	91	36.634
MGP_NODShiLtJ_G0030810	Rab7	91	44.944	MGP_NODShiLtJ_G0027854	Rab2a	84	36.269
MGP_NODShiLtJ_G0030810	Rab7	91	45.833	MGP_NODShiLtJ_G0034740	Rab11a	87	38.686
MGP_NODShiLtJ_G0030810	Rab7	94	43.478	MGP_NODShiLtJ_G0015768	Rab23	70	33.918
MGP_NODShiLtJ_G0030810	Rab7	95	62.667	MGP_NODShiLtJ_G0036041	Rab9	88	54.237
MGP_NODShiLtJ_G0030810	Rab7	91	44.944	MGP_NODShiLtJ_G0027215	Rab25	75	39.157
MGP_NODShiLtJ_G0030810	Rab7	100	39.241	MGP_NODShiLtJ_G0017921	Rab1a	78	39.264
MGP_NODShiLtJ_G0030810	Rab7	73	33.113	MGP_NODShiLtJ_G0027505	Nras	95	33.108
MGP_NODShiLtJ_G0030810	Rab7	91	43.836	MGP_NODShiLtJ_G0035482	Rab33a	85	36.111
MGP_NODShiLtJ_G0030810	Rab7	97	35.789	MGP_NODShiLtJ_G0031397	Rasl2-9	75	33.728
MGP_NODShiLtJ_G0030810	Rab7	90	50.704	MGP_NODShiLtJ_G0034993	Rab6b	94	36.683
MGP_NODShiLtJ_G0030810	Rab7	97	63.636	MGP_NODShiLtJ_G0035888	Rab9b	99	53.202
MGP_NODShiLtJ_G0030810	Rab7	95	37.333	MGP_NODShiLtJ_G0019419	Dnajc27	60	36.145