EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NODShiLtJ_G0031033 (Gene tree)
Gene ID
-
Gene Symbol
Apobec1
Alias
Cdar1
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 1
Gene Type
protein_coding
Species
Mus_musculus_nodshiltj
Status
putative
Strand
Minus strand
Length
38452 bases
Position
chr6:137965915-138004366
Accession
103298
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NODShiLtJ_P0079544APOBEC_NPF08210.118.3e-3011
MGP_NODShiLtJ_P0079545APOBEC_NPF08210.118.3e-3011
MGP_NODShiLtJ_P0079546APOBEC_NPF08210.118.3e-3011
MGP_NODShiLtJ_P0079547APOBEC_NPF08210.114.2e-1711
MGP_NODShiLtJ_P0079548APOBEC_NPF08210.113.1e-1311
MGP_NODShiLtJ_P0079544APOBEC_CPF05240.141.8e-2211
MGP_NODShiLtJ_P0079545APOBEC_CPF05240.141.8e-2211
MGP_NODShiLtJ_P0079546APOBEC_CPF05240.141.8e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NODShiLtJ_T0079551-560--- (aa)--
MGP_NODShiLtJ_T0079550-360-MGP_NODShiLtJ_P007955025 (aa)--
MGP_NODShiLtJ_T0079552-520--- (aa)--
MGP_NODShiLtJ_T0079546-2160-MGP_NODShiLtJ_P0079546229 (aa)--
MGP_NODShiLtJ_T0079547-666-MGP_NODShiLtJ_P0079547121 (aa)--
MGP_NODShiLtJ_T0079544-2298XM_006505401MGP_NODShiLtJ_P0079544229 (aa)XP_006505464P51908
MGP_NODShiLtJ_T0079545-2105-MGP_NODShiLtJ_P0079545229 (aa)--
MGP_NODShiLtJ_T0079548-775-MGP_NODShiLtJ_P0079548113 (aa)--
MGP_NODShiLtJ_T0079549-372-MGP_NODShiLtJ_P007954943 (aa)--
Gene Model
Click here to download MGP_NODShiLtJ_G0031033's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0031033's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NODShiLtJ_G0031033Apobec15639.706MGP_NODShiLtJ_G0031032Aicda5341.509
MGP_NODShiLtJ_G0031033Apobec17434.737MGP_NODShiLtJ_G0021919Apobec38438.028

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