EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0031091 (Gene tree)
Gene ID: -
Gene Symbol: Chd4
Alias: 9530019N15Rik|AA617397|BC005710|D6Ertd380e|Mi-2beta|mKIAA4075
Full Name: chromodomain helicase DNA binding protein 4
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 36393 bases
Position: chr6:140897023-140933415
Accession: 1344380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0079810	ResIII	PF04851.15	6.2e-10	1	1
MGP_NODShiLtJ_P0079811	ResIII	PF04851.15	6.6e-10	1	1
MGP_NODShiLtJ_P0079809	ResIII	PF04851.15	6.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0079809	-	6705	XM_006505280	MGP_NODShiLtJ_P0079809	1917 (aa)	XP_006505343	Q6PDQ2
MGP_NODShiLtJ_T0079814	-	618	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0079815	-	1332	-	MGP_NODShiLtJ_P0079815	444 (aa)	-	-
MGP_NODShiLtJ_T0079816	-	824	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0079810	-	6660	-	MGP_NODShiLtJ_P0079810	1904 (aa)	-	-
MGP_NODShiLtJ_T0079811	-	6545	-	MGP_NODShiLtJ_P0079811	1924 (aa)	-	-
MGP_NODShiLtJ_T0079812	-	369	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0079813	-	750	-	MGP_NODShiLtJ_P0079813	51 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

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Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0031091	Chd4	95	70.513	MGP_NODShiLtJ_G0018377	Chd3	91	80.841
MGP_NODShiLtJ_G0031091	Chd4	96	72.343	MGP_NODShiLtJ_G0028985	Chd5	91	73.014