EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0031388 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 3754 bases
Position: chr7:2222132-2225885
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0081099	zf-C2H2	PF00096.26	2.7e-46	1	8
MGP_NODShiLtJ_P0081099	zf-C2H2	PF00096.26	2.7e-46	2	8
MGP_NODShiLtJ_P0081099	zf-C2H2	PF00096.26	2.7e-46	3	8
MGP_NODShiLtJ_P0081099	zf-C2H2	PF00096.26	2.7e-46	4	8
MGP_NODShiLtJ_P0081099	zf-C2H2	PF00096.26	2.7e-46	5	8
MGP_NODShiLtJ_P0081099	zf-C2H2	PF00096.26	2.7e-46	6	8
MGP_NODShiLtJ_P0081099	zf-C2H2	PF00096.26	2.7e-46	7	8
MGP_NODShiLtJ_P0081099	zf-C2H2	PF00096.26	2.7e-46	8	8
MGP_NODShiLtJ_P0081099	zf-met	PF12874.7	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0081099	-	2271	-	MGP_NODShiLtJ_P0081099	756 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0031388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0031388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0031388	-	66	31.675	MGP_NODShiLtJ_G0021849	Zfp251	63	37.278
MGP_NODShiLtJ_G0031388	-	73	30.796	MGP_NODShiLtJ_G0023077	Zscan10	86	31.579
MGP_NODShiLtJ_G0031388	-	66	31.343	MGP_NODShiLtJ_G0031804	Zfp420	95	30.691
MGP_NODShiLtJ_G0031388	-	99	100.000	MGP_NODShiLtJ_G0031387	Zfp865	99	100.000
MGP_NODShiLtJ_G0031388	-	66	42.593	MGP_NODShiLtJ_G0031384	Zfp579	75	41.379
MGP_NODShiLtJ_G0031388	-	71	30.072	MGP_NODShiLtJ_G0033787	Zfp319	87	38.835