EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0031556 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 47116 bases
Position: chr7:18247160-18294275
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0081527	KH_1	PF00013.29	5e-47	1	3
MGP_NODShiLtJ_P0081527	KH_1	PF00013.29	5e-47	2	3
MGP_NODShiLtJ_P0081527	KH_1	PF00013.29	5e-47	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0081527	-	8230	-	MGP_NODShiLtJ_P0081527	506 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0031556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0031556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0031556	-	50	40.845	MGP_NODShiLtJ_G0017249	Pcbp3	69	40.351
MGP_NODShiLtJ_G0031556	-	52	37.681	MGP_NODShiLtJ_G0020473	Hnrnpk	57	38.462
MGP_NODShiLtJ_G0031556	-	99	67.041	MGP_NODShiLtJ_G0019570	Nova1	64	73.333
MGP_NODShiLtJ_G0031556	-	53	41.538	MGP_NODShiLtJ_G0035031	Pcbp4	76	41.538
MGP_NODShiLtJ_G0031556	-	53	36.765	MGP_NODShiLtJ_G0027804	Fubp1	61	36.765
MGP_NODShiLtJ_G0031556	-	97	100.000	MGP_NODShiLtJ_G0031557	Nova2	100	100.000