EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0031634 (Gene tree)
Gene ID: -
Gene Symbol: Zfp108
Alias: -
Full Name: zinc finger protein 108
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 8397 bases
Position: chr7:23961407-23969803
Accession: 1891198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0081765	zf-C2H2	PF00096.26	2.6e-65	1	12
MGP_NODShiLtJ_P0081765	zf-C2H2	PF00096.26	2.6e-65	2	12
MGP_NODShiLtJ_P0081765	zf-C2H2	PF00096.26	2.6e-65	3	12
MGP_NODShiLtJ_P0081765	zf-C2H2	PF00096.26	2.6e-65	4	12
MGP_NODShiLtJ_P0081765	zf-C2H2	PF00096.26	2.6e-65	5	12
MGP_NODShiLtJ_P0081765	zf-C2H2	PF00096.26	2.6e-65	6	12
MGP_NODShiLtJ_P0081765	zf-C2H2	PF00096.26	2.6e-65	7	12
MGP_NODShiLtJ_P0081765	zf-C2H2	PF00096.26	2.6e-65	8	12
MGP_NODShiLtJ_P0081765	zf-C2H2	PF00096.26	2.6e-65	9	12
MGP_NODShiLtJ_P0081765	zf-C2H2	PF00096.26	2.6e-65	10	12
MGP_NODShiLtJ_P0081765	zf-C2H2	PF00096.26	2.6e-65	11	12
MGP_NODShiLtJ_P0081765	zf-C2H2	PF00096.26	2.6e-65	12	12
MGP_NODShiLtJ_P0081763	zf-C2H2	PF00096.26	2.6e-65	1	12
MGP_NODShiLtJ_P0081763	zf-C2H2	PF00096.26	2.6e-65	2	12
MGP_NODShiLtJ_P0081763	zf-C2H2	PF00096.26	2.6e-65	3	12
MGP_NODShiLtJ_P0081763	zf-C2H2	PF00096.26	2.6e-65	4	12
MGP_NODShiLtJ_P0081763	zf-C2H2	PF00096.26	2.6e-65	5	12
MGP_NODShiLtJ_P0081763	zf-C2H2	PF00096.26	2.6e-65	6	12
MGP_NODShiLtJ_P0081763	zf-C2H2	PF00096.26	2.6e-65	7	12
MGP_NODShiLtJ_P0081763	zf-C2H2	PF00096.26	2.6e-65	8	12
MGP_NODShiLtJ_P0081763	zf-C2H2	PF00096.26	2.6e-65	9	12
MGP_NODShiLtJ_P0081763	zf-C2H2	PF00096.26	2.6e-65	10	12
MGP_NODShiLtJ_P0081763	zf-C2H2	PF00096.26	2.6e-65	11	12
MGP_NODShiLtJ_P0081763	zf-C2H2	PF00096.26	2.6e-65	12	12
MGP_NODShiLtJ_P0081764	zf-C2H2	PF00096.26	2.6e-65	1	12
MGP_NODShiLtJ_P0081764	zf-C2H2	PF00096.26	2.6e-65	2	12
MGP_NODShiLtJ_P0081764	zf-C2H2	PF00096.26	2.6e-65	3	12
MGP_NODShiLtJ_P0081764	zf-C2H2	PF00096.26	2.6e-65	4	12
MGP_NODShiLtJ_P0081764	zf-C2H2	PF00096.26	2.6e-65	5	12
MGP_NODShiLtJ_P0081764	zf-C2H2	PF00096.26	2.6e-65	6	12
MGP_NODShiLtJ_P0081764	zf-C2H2	PF00096.26	2.6e-65	7	12
MGP_NODShiLtJ_P0081764	zf-C2H2	PF00096.26	2.6e-65	8	12
MGP_NODShiLtJ_P0081764	zf-C2H2	PF00096.26	2.6e-65	9	12
MGP_NODShiLtJ_P0081764	zf-C2H2	PF00096.26	2.6e-65	10	12
MGP_NODShiLtJ_P0081764	zf-C2H2	PF00096.26	2.6e-65	11	12
MGP_NODShiLtJ_P0081764	zf-C2H2	PF00096.26	2.6e-65	12	12
MGP_NODShiLtJ_P0081765	zf-met	PF12874.7	7.5e-09	1	1
MGP_NODShiLtJ_P0081763	zf-met	PF12874.7	7.5e-09	1	1
MGP_NODShiLtJ_P0081764	zf-met	PF12874.7	7.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0081765	-	1923	-	MGP_NODShiLtJ_P0081765	640 (aa)	-	-
MGP_NODShiLtJ_T0081764	-	2569	-	MGP_NODShiLtJ_P0081764	640 (aa)	-	-
MGP_NODShiLtJ_T0081763	-	2524	XM_017322371	MGP_NODShiLtJ_P0081763	640 (aa)	XP_017177860	E9Q8I5

Gene Model

Click here to download MGP_NODShiLtJ_G0031634's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0031634's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0031634	Zfp108	66	44.207	MGP_NODShiLtJ_G0028853	Zbtb17	56	44.207
MGP_NODShiLtJ_G0031634	Zfp108	66	38.411	MGP_NODShiLtJ_G0030639	Prdm5	68	46.154
MGP_NODShiLtJ_G0031634	Zfp108	99	63.372	MGP_NODShiLtJ_G0031629	Zfp112	99	63.372
MGP_NODShiLtJ_G0031634	Zfp108	70	45.299	MGP_NODShiLtJ_G0032844	E430018J23Rik	62	45.299
MGP_NODShiLtJ_G0031634	Zfp108	69	53.957	MGP_NODShiLtJ_G0032840	Zfp768	51	53.521
MGP_NODShiLtJ_G0031634	Zfp108	99	45.455	MGP_NODShiLtJ_G0032842	9130019O22Rik	95	45.455
MGP_NODShiLtJ_G0031634	Zfp108	70	45.299	MGP_NODShiLtJ_G0032843	-	62	45.299
MGP_NODShiLtJ_G0031634	Zfp108	99	41.972	MGP_NODShiLtJ_G0033575	Zfp882	99	41.972
MGP_NODShiLtJ_G0031634	Zfp108	99	53.782	MGP_NODShiLtJ_G0020539	Rslcan18	79	55.814
MGP_NODShiLtJ_G0031634	Zfp108	71	47.727	MGP_NODShiLtJ_G0018250	Zfp867	96	53.659
MGP_NODShiLtJ_G0031634	Zfp108	78	54.348	MGP_NODShiLtJ_G0031938	Zfp715	66	59.524
MGP_NODShiLtJ_G0031634	Zfp108	58	45.000	MGP_NODShiLtJ_G0024432	Zfp236	65	44.643
MGP_NODShiLtJ_G0031634	Zfp108	66	48.077	MGP_NODShiLtJ_G0029310	Zbtb49	59	49.296
MGP_NODShiLtJ_G0031634	Zfp108	68	46.352	MGP_NODShiLtJ_G0018202	Zfp672	99	41.250
MGP_NODShiLtJ_G0031634	Zfp108	99	50.862	MGP_NODShiLtJ_G0033947	Zfp1	100	49.035
MGP_NODShiLtJ_G0031634	Zfp108	67	53.448	MGP_NODShiLtJ_G0030984	Zfp637	78	50.521
MGP_NODShiLtJ_G0031634	Zfp108	58	42.194	MGP_NODShiLtJ_G0023077	Zscan10	80	39.617
MGP_NODShiLtJ_G0031634	Zfp108	99	42.472	MGP_NODShiLtJ_G0023070	Zfp945	98	65.116
MGP_NODShiLtJ_G0031634	Zfp108	99	47.876	MGP_NODShiLtJ_G0026280	Zfp661	97	47.876
MGP_NODShiLtJ_G0031634	Zfp108	79	55.556	MGP_NODShiLtJ_G0031804	Zfp420	99	55.556
MGP_NODShiLtJ_G0031634	Zfp108	99	47.294	MGP_NODShiLtJ_G0034217	Zfp26	90	47.357
MGP_NODShiLtJ_G0031634	Zfp108	99	46.750	MGP_NODShiLtJ_G0020540	Zfp759	88	48.667
MGP_NODShiLtJ_G0031634	Zfp108	99	50.836	MGP_NODShiLtJ_G0018107	Zfp454	98	50.836
MGP_NODShiLtJ_G0031634	Zfp108	99	47.230	MGP_NODShiLtJ_G0023048	Zfp677	98	47.230
MGP_NODShiLtJ_G0031634	Zfp108	99	49.631	MGP_NODShiLtJ_G0021849	Zfp251	92	49.631
MGP_NODShiLtJ_G0031634	Zfp108	72	41.329	MGP_NODShiLtJ_G0033787	Zfp319	91	37.164
MGP_NODShiLtJ_G0031634	Zfp108	73	36.318	MGP_NODShiLtJ_G0031667	Zfp574	73	42.105
MGP_NODShiLtJ_G0031634	Zfp108	99	51.902	MGP_NODShiLtJ_G0020555	Zfp748	98	54.545
MGP_NODShiLtJ_G0031634	Zfp108	66	52.000	MGP_NODShiLtJ_G0020128	Zkscan4	53	52.000
MGP_NODShiLtJ_G0031634	Zfp108	70	34.565	MGP_NODShiLtJ_G0026748	Zfp64	73	35.093
MGP_NODShiLtJ_G0031634	Zfp108	66	40.435	MGP_NODShiLtJ_G0031387	Zfp865	78	33.032
MGP_NODShiLtJ_G0031634	Zfp108	99	75.964	MGP_NODShiLtJ_G0031630	Zfp235	100	64.243
MGP_NODShiLtJ_G0031634	Zfp108	99	50.201	MGP_NODShiLtJ_G0031636	Zfp61	99	50.201
MGP_NODShiLtJ_G0031634	Zfp108	99	58.333	MGP_NODShiLtJ_G0031637	Zfp94	97	58.333
MGP_NODShiLtJ_G0031634	Zfp108	99	47.606	MGP_NODShiLtJ_G0023050	Zfp51	94	47.754
MGP_NODShiLtJ_G0031634	Zfp108	74	35.854	MGP_NODShiLtJ_G0030504	Repin1	92	39.130
MGP_NODShiLtJ_G0031634	Zfp108	68	48.077	MGP_NODShiLtJ_G0031379	Zfp628	62	49.102
MGP_NODShiLtJ_G0031634	Zfp108	86	52.083	MGP_NODShiLtJ_G0026710	Zfp334	84	52.083