EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0031642 (Gene tree)
Gene ID: -
Gene Symbol: Irgc1
Alias: F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc|LOC210145|LOC381989
Full Name: immunity-related GTPase family%2C cinema 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 20859 bases
Position: chr7:24160582-24181440
Accession: 2685948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0081796	MMR_HSR1	PF01926.23	6.3e-06	1	1
MGP_NODShiLtJ_P0081797	MMR_HSR1	PF01926.23	6.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0081800	-	344	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0081796	-	1835	XM_006539708	MGP_NODShiLtJ_P0081796	463 (aa)	XP_006539771	A0A0U1RQ16
MGP_NODShiLtJ_T0081797	-	1737	-	MGP_NODShiLtJ_P0081797	463 (aa)	-	-
MGP_NODShiLtJ_T0081798	-	383	-	MGP_NODShiLtJ_P0081798	82 (aa)	-	-
MGP_NODShiLtJ_T0081799	-	659	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0031642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0031642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0031642	Irgc1	82	33.158	MGP_NODShiLtJ_G0027322	Iigp1	90	33.158
MGP_NODShiLtJ_G0031642	Irgc1	68	37.224	MGP_NODShiLtJ_G0024288	Gm4951	77	37.224
MGP_NODShiLtJ_G0031642	Irgc1	65	33.775	MGP_NODShiLtJ_G0018198	Igtp	68	33.775
MGP_NODShiLtJ_G0031642	Irgc1	68	41.401	MGP_NODShiLtJ_G0018069	Ifi47	75	41.401
MGP_NODShiLtJ_G0031642	Irgc1	58	39.777	MGP_NODShiLtJ_G0018063	-	89	39.777
MGP_NODShiLtJ_G0031642	Irgc1	71	30.183	MGP_NODShiLtJ_G0018061	Irgm1	76	35.169
MGP_NODShiLtJ_G0031642	Irgc1	82	33.010	MGP_NODShiLtJ_G0018067	Tgtp1	90	32.524
MGP_NODShiLtJ_G0031642	Irgc1	62	32.872	MGP_NODShiLtJ_G0018199	Irgm2	69	32.872