EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0032323 (Gene tree)
Gene ID: -
Gene Symbol: Rab30
Alias: 5033421K01Rik|AI323892|Rsb30
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 91637 bases
Position: chr7:103458904-103550540
Accession: 1923235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0084620	MMR_HSR1	PF01926.23	2.3e-05	1	1
MGP_NODShiLtJ_P0084621	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0084622	-	1304	-	MGP_NODShiLtJ_P0084622	175 (aa)	-	-
MGP_NODShiLtJ_T0084621	-	1406	-	MGP_NODShiLtJ_P0084621	203 (aa)	-	-
MGP_NODShiLtJ_T0084620	-	2038	XM_006508293	MGP_NODShiLtJ_P0084620	203 (aa)	XP_006508356	Q923S9

Gene Model

Click here to download MGP_NODShiLtJ_G0032323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0032323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0032323	Rab30	81	51.176	MGP_NODShiLtJ_G0035482	Rab33a	72	51.176
MGP_NODShiLtJ_G0032323	Rab30	78	48.447	MGP_NODShiLtJ_G0035647	Rab39b	76	48.447
MGP_NODShiLtJ_G0032323	Rab30	89	40.556	MGP_NODShiLtJ_G0025488	Rab14	91	43.478
MGP_NODShiLtJ_G0032323	Rab30	80	42.331	MGP_NODShiLtJ_G0026777	Rab22a	84	42.331
MGP_NODShiLtJ_G0032323	Rab30	90	42.391	MGP_NODShiLtJ_G0027854	Rab2a	87	42.391
MGP_NODShiLtJ_G0032323	Rab30	82	50.000	MGP_NODShiLtJ_G0024523	Rab1b	83	50.000
MGP_NODShiLtJ_G0032323	Rab30	86	43.678	MGP_NODShiLtJ_G0023711	Rab5a	81	43.678
MGP_NODShiLtJ_G0032323	Rab30	78	38.272	MGP_NODShiLtJ_G0017209	Rab36	61	38.272
MGP_NODShiLtJ_G0032323	Rab30	82	50.602	MGP_NODShiLtJ_G0017921	Rab1a	81	50.602
MGP_NODShiLtJ_G0032323	Rab30	88	47.778	MGP_NODShiLtJ_G0023809	Rab12	62	47.778
MGP_NODShiLtJ_G0032323	Rab30	76	42.857	MGP_NODShiLtJ_G0023800	Rab31	79	42.857
MGP_NODShiLtJ_G0032323	Rab30	81	33.735	MGP_NODShiLtJ_G0034970	Mras	79	33.735
MGP_NODShiLtJ_G0032323	Rab30	95	38.889	MGP_NODShiLtJ_G0036041	Rab9	97	38.889
MGP_NODShiLtJ_G0032323	Rab30	89	34.426	MGP_NODShiLtJ_G0033021	Hras	94	34.426
MGP_NODShiLtJ_G0032323	Rab30	84	45.614	MGP_NODShiLtJ_G0021129	Rab2b	81	48.718
MGP_NODShiLtJ_G0032323	Rab30	77	35.625	MGP_NODShiLtJ_G0018616	Rab34	62	35.625
MGP_NODShiLtJ_G0032323	Rab30	80	48.466	MGP_NODShiLtJ_G0019228	Rab37	75	48.466
MGP_NODShiLtJ_G0032323	Rab30	87	37.500	MGP_NODShiLtJ_G0015768	Rab23	74	37.500
MGP_NODShiLtJ_G0032323	Rab30	81	32.317	MGP_NODShiLtJ_G0031397	Rasl2-9	75	32.317
MGP_NODShiLtJ_G0032323	Rab30	83	42.012	MGP_NODShiLtJ_G0019020	Rab5c	78	42.012
MGP_NODShiLtJ_G0032323	Rab30	79	39.157	MGP_NODShiLtJ_G0035888	Rab9b	82	39.157
MGP_NODShiLtJ_G0032323	Rab30	79	41.615	MGP_NODShiLtJ_G0034993	Rab6b	77	41.615
MGP_NODShiLtJ_G0032323	Rab30	83	42.857	MGP_NODShiLtJ_G0017738	Rab5b	78	42.857
MGP_NODShiLtJ_G0032323	Rab30	82	31.737	MGP_NODShiLtJ_G0029158	Rheb	88	31.737
MGP_NODShiLtJ_G0032323	Rab30	79	34.756	MGP_NODShiLtJ_G0022069	Rabl2	70	34.756
MGP_NODShiLtJ_G0032323	Rab30	86	42.529	MGP_NODShiLtJ_G0019721	Rab15	82	42.529
MGP_NODShiLtJ_G0032323	Rab30	81	47.059	MGP_NODShiLtJ_G0027010	Rab33b	74	47.059
MGP_NODShiLtJ_G0032323	Rab30	88	38.043	MGP_NODShiLtJ_G0030810	Rab7	91	45.833
MGP_NODShiLtJ_G0032323	Rab30	97	39.524	MGP_NODShiLtJ_G0023355	Rab11b	96	39.524
MGP_NODShiLtJ_G0032323	Rab30	97	41.546	MGP_NODShiLtJ_G0027215	Rab25	96	41.546
MGP_NODShiLtJ_G0032323	Rab30	97	37.981	MGP_NODShiLtJ_G0034740	Rab11a	91	44.604
MGP_NODShiLtJ_G0032323	Rab30	84	34.503	MGP_NODShiLtJ_G0027505	Nras	96	34.932
MGP_NODShiLtJ_G0032323	Rab30	79	42.857	MGP_NODShiLtJ_G0032382	Rab6a	77	42.857
MGP_NODShiLtJ_G0032323	Rab30	87	33.146	MGP_NODShiLtJ_G0031291	Kras	93	33.146