EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0032382 (Gene tree)
Gene ID: -
Gene Symbol: Rab6a
Alias: 2610028L11Rik|AA419671|Rab6|Rab6 {ECO:0000313|EMBL:EDL16462.1,GN ECO:0000313|MGI:MGI:894313}|Rab6 {ECO:0000313|EMBL:EDL16464.1,GN ECO:0000313|MGI:MGI:894313}|Rab6A
Full Name: RAB6A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 37700 bases
Position: chr7:112534864-112572563
Accession: 894313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0084877	MMR_HSR1	PF01926.23	9.1e-05	1	1
MGP_NODShiLtJ_P0084878	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0084878	-	3106	-	MGP_NODShiLtJ_P0084878	208 (aa)	-	-
MGP_NODShiLtJ_T0084879	-	567	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0084876	-	2613	-	MGP_NODShiLtJ_P0084876	175 (aa)	-	P35279
MGP_NODShiLtJ_T0084877	-	3210	-	MGP_NODShiLtJ_P0084877	208 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0032382's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0032382's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0032382	Rab6a	98	41.546	MGP_NODShiLtJ_G0023711	Rab5a	95	41.546
MGP_NODShiLtJ_G0032382	Rab6a	85	37.634	MGP_NODShiLtJ_G0018616	Rab34	72	37.634
MGP_NODShiLtJ_G0032382	Rab6a	88	31.915	MGP_NODShiLtJ_G0022069	Rabl2	83	31.915
MGP_NODShiLtJ_G0032382	Rab6a	100	90.865	MGP_NODShiLtJ_G0034993	Rab6b	100	90.865
MGP_NODShiLtJ_G0032382	Rab6a	95	30.151	MGP_NODShiLtJ_G0033021	Hras	98	30.151
MGP_NODShiLtJ_G0032382	Rab6a	79	33.721	MGP_NODShiLtJ_G0035888	Rab9b	84	33.721
MGP_NODShiLtJ_G0032382	Rab6a	56	30.000	MGP_NODShiLtJ_G0019063	Arl4d	58	30.000
MGP_NODShiLtJ_G0032382	Rab6a	75	32.278	MGP_NODShiLtJ_G0031291	Kras	83	32.278
MGP_NODShiLtJ_G0032382	Rab6a	77	42.857	MGP_NODShiLtJ_G0032323	Rab30	79	42.857
MGP_NODShiLtJ_G0032382	Rab6a	77	40.828	MGP_NODShiLtJ_G0021129	Rab2b	79	43.421
MGP_NODShiLtJ_G0032382	Rab6a	91	38.462	MGP_NODShiLtJ_G0027854	Rab2a	89	38.462
MGP_NODShiLtJ_G0032382	Rab6a	93	35.500	MGP_NODShiLtJ_G0036041	Rab9	96	35.500
MGP_NODShiLtJ_G0032382	Rab6a	90	36.458	MGP_NODShiLtJ_G0019721	Rab15	91	36.458
MGP_NODShiLtJ_G0032382	Rab6a	76	39.873	MGP_NODShiLtJ_G0015768	Rab23	66	39.873
MGP_NODShiLtJ_G0032382	Rab6a	84	35.955	MGP_NODShiLtJ_G0034740	Rab11a	84	38.281
MGP_NODShiLtJ_G0032382	Rab6a	95	37.561	MGP_NODShiLtJ_G0035482	Rab33a	86	37.561
MGP_NODShiLtJ_G0032382	Rab6a	76	32.500	MGP_NODShiLtJ_G0034970	Mras	76	32.500
MGP_NODShiLtJ_G0032382	Rab6a	80	38.922	MGP_NODShiLtJ_G0023800	Rab31	86	38.922
MGP_NODShiLtJ_G0032382	Rab6a	76	40.252	MGP_NODShiLtJ_G0023809	Rab12	55	40.252
MGP_NODShiLtJ_G0032382	Rab6a	75	39.623	MGP_NODShiLtJ_G0035647	Rab39b	75	39.623
MGP_NODShiLtJ_G0032382	Rab6a	77	30.769	MGP_NODShiLtJ_G0030188	Rasl11a	69	30.769
MGP_NODShiLtJ_G0032382	Rab6a	81	39.053	MGP_NODShiLtJ_G0026777	Rab22a	87	39.053
MGP_NODShiLtJ_G0032382	Rab6a	94	36.232	MGP_NODShiLtJ_G0025488	Rab14	95	36.232
MGP_NODShiLtJ_G0032382	Rab6a	88	34.239	MGP_NODShiLtJ_G0027215	Rab25	86	34.239
MGP_NODShiLtJ_G0032382	Rab6a	94	38.384	MGP_NODShiLtJ_G0017921	Rab1a	94	38.384
MGP_NODShiLtJ_G0032382	Rab6a	75	32.911	MGP_NODShiLtJ_G0027505	Nras	98	33.557
MGP_NODShiLtJ_G0032382	Rab6a	75	38.217	MGP_NODShiLtJ_G0023355	Rab11b	72	38.217
MGP_NODShiLtJ_G0032382	Rab6a	84	44.000	MGP_NODShiLtJ_G0019020	Rab5c	81	44.000
MGP_NODShiLtJ_G0032382	Rab6a	75	35.625	MGP_NODShiLtJ_G0029158	Rheb	85	35.625
MGP_NODShiLtJ_G0032382	Rab6a	94	36.000	MGP_NODShiLtJ_G0030810	Rab7	90	50.704
MGP_NODShiLtJ_G0032382	Rab6a	94	35.784	MGP_NODShiLtJ_G0027010	Rab33b	86	35.784
MGP_NODShiLtJ_G0032382	Rab6a	80	45.181	MGP_NODShiLtJ_G0017738	Rab5b	77	45.181
MGP_NODShiLtJ_G0032382	Rab6a	77	42.857	MGP_NODShiLtJ_G0019228	Rab37	75	42.857
MGP_NODShiLtJ_G0032382	Rab6a	93	38.384	MGP_NODShiLtJ_G0024523	Rab1b	96	38.384
MGP_NODShiLtJ_G0032382	Rab6a	94	36.150	MGP_NODShiLtJ_G0017209	Rab36	80	36.150