EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0032767 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6
Full Name: trinucleotide repeat containing 6a
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 79192 bases
Position: chr7:138026039-138105230
Accession: 2385292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0085958	Ago_hook	PF10427.9	3.4e-19	1	1
MGP_NODShiLtJ_P0085955	Ago_hook	PF10427.9	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0085963	-	3297	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0085962	-	463	-	MGP_NODShiLtJ_P0085962	154 (aa)	-	-
MGP_NODShiLtJ_T0085961	-	606	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0085960	-	939	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0085958	-	5220	-	MGP_NODShiLtJ_P0085958	1397 (aa)	-	-
MGP_NODShiLtJ_T0085959	-	4312	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0085956	-	3577	-	MGP_NODShiLtJ_P0085956	35 (aa)	-	-
MGP_NODShiLtJ_T0085957	-	1783	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0085954	-	310	-	MGP_NODShiLtJ_P0085954	53 (aa)	-	-
MGP_NODShiLtJ_T0085955	-	8131	-	MGP_NODShiLtJ_P0085955	1880 (aa)	-	-
MGP_NODShiLtJ_T0085953	-	640	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0032767's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0032767	Tnrc6a	99	39.671	MGP_NODShiLtJ_G0021933	Tnrc6b	98	37.120
MGP_NODShiLtJ_G0032767	Tnrc6a	98	44.482	MGP_NODShiLtJ_G0019305	Tnrc6c	99	40.570