EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0032834 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3|Pnutl3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 21556 bases
Position: chr7:142403851-142425406
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0086365	MMR_HSR1	PF01926.23	2e-08	1	1
MGP_NODShiLtJ_P0086364	MMR_HSR1	PF01926.23	3.5e-08	1	1
MGP_NODShiLtJ_P0086362	MMR_HSR1	PF01926.23	5.1e-08	1	1
MGP_NODShiLtJ_P0086361	MMR_HSR1	PF01926.23	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0086364	-	706	-	MGP_NODShiLtJ_P0086364	186 (aa)	-	-
MGP_NODShiLtJ_T0086365	-	599	-	MGP_NODShiLtJ_P0086365	145 (aa)	-	-
MGP_NODShiLtJ_T0086366	-	821	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0086367	-	242	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0086360	-	575	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0086361	-	1264	-	MGP_NODShiLtJ_P0086361	366 (aa)	-	-
MGP_NODShiLtJ_T0086362	-	1048	-	MGP_NODShiLtJ_P0086362	328 (aa)	-	-
MGP_NODShiLtJ_T0086363	-	789	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0086368	-	713	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0032834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0032834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0032834	Sept1	100	38.095	MGP_NODShiLtJ_G0018150	Sept8	76	36.765
MGP_NODShiLtJ_G0032834	Sept1	100	59.310	MGP_NODShiLtJ_G0034296	Sept7	76	49.709
MGP_NODShiLtJ_G0032834	Sept1	100	50.000	MGP_NODShiLtJ_G0019303	Sept9	83	46.000
MGP_NODShiLtJ_G0032834	Sept1	100	66.897	MGP_NODShiLtJ_G0018755	Sept4	99	64.516
MGP_NODShiLtJ_G0032834	Sept1	100	50.685	MGP_NODShiLtJ_G0021968	Sept3	86	46.575
MGP_NODShiLtJ_G0032834	Sept1	100	40.816	MGP_NODShiLtJ_G0029559	Sept11	76	40.762
MGP_NODShiLtJ_G0032834	Sept1	100	47.260	MGP_NODShiLtJ_G0022310	Sept12	77	43.775
MGP_NODShiLtJ_G0032834	Sept1	100	40.136	MGP_NODShiLtJ_G0035427	Sept6	76	41.349
MGP_NODShiLtJ_G0032834	Sept1	100	43.537	MGP_NODShiLtJ_G0017113	Sept10	71	40.064
MGP_NODShiLtJ_G0032834	Sept1	100	68.276	MGP_NODShiLtJ_G0022447	Sept5	93	63.068
MGP_NODShiLtJ_G0032834	Sept1	100	64.828	MGP_NODShiLtJ_G0016212	Sept2	100	60.748