EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0032842 (Gene tree)
Gene ID: -
Gene Symbol: 9130019O22Rik
Alias: -
Full Name: RIKEN cDNA 9130019O22 gene
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 5649 bases
Position: chr7:142602128-142607776
Accession: 1926171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0086388	zf-C2H2	PF00096.26	1.9e-65	1	13
MGP_NODShiLtJ_P0086388	zf-C2H2	PF00096.26	1.9e-65	2	13
MGP_NODShiLtJ_P0086388	zf-C2H2	PF00096.26	1.9e-65	3	13
MGP_NODShiLtJ_P0086388	zf-C2H2	PF00096.26	1.9e-65	4	13
MGP_NODShiLtJ_P0086388	zf-C2H2	PF00096.26	1.9e-65	5	13
MGP_NODShiLtJ_P0086388	zf-C2H2	PF00096.26	1.9e-65	6	13
MGP_NODShiLtJ_P0086388	zf-C2H2	PF00096.26	1.9e-65	7	13
MGP_NODShiLtJ_P0086388	zf-C2H2	PF00096.26	1.9e-65	8	13
MGP_NODShiLtJ_P0086388	zf-C2H2	PF00096.26	1.9e-65	9	13
MGP_NODShiLtJ_P0086388	zf-C2H2	PF00096.26	1.9e-65	10	13
MGP_NODShiLtJ_P0086388	zf-C2H2	PF00096.26	1.9e-65	11	13
MGP_NODShiLtJ_P0086388	zf-C2H2	PF00096.26	1.9e-65	12	13
MGP_NODShiLtJ_P0086388	zf-C2H2	PF00096.26	1.9e-65	13	13
MGP_NODShiLtJ_P0086388	zf-met	PF12874.7	1.5e-07	1	2
MGP_NODShiLtJ_P0086388	zf-met	PF12874.7	1.5e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0086388	-	3348	-	MGP_NODShiLtJ_P0086388	543 (aa)	-	E9PX22

Gene Model

Click here to download MGP_NODShiLtJ_G0032842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0032842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0032842	9130019O22Rik	90	35.568	MGP_NODShiLtJ_G0023048	Zfp677	98	35.568
MGP_NODShiLtJ_G0032842	9130019O22Rik	70	43.750	MGP_NODShiLtJ_G0031629	Zfp112	56	43.750
MGP_NODShiLtJ_G0032842	9130019O22Rik	93	42.473	MGP_NODShiLtJ_G0031938	Zfp715	96	43.695
MGP_NODShiLtJ_G0032842	9130019O22Rik	67	47.788	MGP_NODShiLtJ_G0030984	Zfp637	71	45.078
MGP_NODShiLtJ_G0032842	9130019O22Rik	67	40.000	MGP_NODShiLtJ_G0028853	Zbtb17	58	40.000
MGP_NODShiLtJ_G0032842	9130019O22Rik	73	40.789	MGP_NODShiLtJ_G0016424	Zbtb41	54	33.667
MGP_NODShiLtJ_G0032842	9130019O22Rik	94	41.558	MGP_NODShiLtJ_G0021849	Zfp251	94	41.558
MGP_NODShiLtJ_G0032842	9130019O22Rik	94	43.421	MGP_NODShiLtJ_G0020555	Zfp748	99	43.421
MGP_NODShiLtJ_G0032842	9130019O22Rik	72	50.000	MGP_NODShiLtJ_G0031387	Zfp865	79	36.937
MGP_NODShiLtJ_G0032842	9130019O22Rik	95	39.062	MGP_NODShiLtJ_G0018250	Zfp867	95	39.062
MGP_NODShiLtJ_G0032842	9130019O22Rik	78	41.451	MGP_NODShiLtJ_G0029310	Zbtb49	66	45.455
MGP_NODShiLtJ_G0032842	9130019O22Rik	70	44.503	MGP_NODShiLtJ_G0031379	Zfp628	62	39.919
MGP_NODShiLtJ_G0032842	9130019O22Rik	95	36.036	MGP_NODShiLtJ_G0033575	Zfp882	99	36.036
MGP_NODShiLtJ_G0032842	9130019O22Rik	96	45.020	MGP_NODShiLtJ_G0023050	Zfp51	95	45.020
MGP_NODShiLtJ_G0032842	9130019O22Rik	70	40.511	MGP_NODShiLtJ_G0018202	Zfp672	89	43.407
MGP_NODShiLtJ_G0032842	9130019O22Rik	68	48.352	MGP_NODShiLtJ_G0031804	Zfp420	98	48.352
MGP_NODShiLtJ_G0032842	9130019O22Rik	90	45.161	MGP_NODShiLtJ_G0033947	Zfp1	99	45.161
MGP_NODShiLtJ_G0032842	9130019O22Rik	91	43.191	MGP_NODShiLtJ_G0020539	Rslcan18	79	43.191
MGP_NODShiLtJ_G0032842	9130019O22Rik	84	47.297	MGP_NODShiLtJ_G0024432	Zfp236	67	47.297
MGP_NODShiLtJ_G0032842	9130019O22Rik	67	43.373	MGP_NODShiLtJ_G0030504	Repin1	92	38.929
MGP_NODShiLtJ_G0032842	9130019O22Rik	92	45.600	MGP_NODShiLtJ_G0034217	Zfp26	89	45.600
MGP_NODShiLtJ_G0032842	9130019O22Rik	100	73.885	MGP_NODShiLtJ_G0032844	E430018J23Rik	97	73.885
MGP_NODShiLtJ_G0032842	9130019O22Rik	100	73.885	MGP_NODShiLtJ_G0032843	-	97	73.885
MGP_NODShiLtJ_G0032842	9130019O22Rik	69	46.377	MGP_NODShiLtJ_G0032840	Zfp768	52	46.245
MGP_NODShiLtJ_G0032842	9130019O22Rik	69	38.674	MGP_NODShiLtJ_G0031667	Zfp574	88	39.779
MGP_NODShiLtJ_G0032842	9130019O22Rik	90	44.695	MGP_NODShiLtJ_G0018107	Zfp454	97	37.859
MGP_NODShiLtJ_G0032842	9130019O22Rik	71	41.212	MGP_NODShiLtJ_G0029645	Gfi1	52	41.212
MGP_NODShiLtJ_G0032842	9130019O22Rik	87	45.902	MGP_NODShiLtJ_G0026710	Zfp334	76	45.902
MGP_NODShiLtJ_G0032842	9130019O22Rik	92	46.721	MGP_NODShiLtJ_G0026280	Zfp661	96	46.721
MGP_NODShiLtJ_G0032842	9130019O22Rik	68	40.394	MGP_NODShiLtJ_G0023077	Zscan10	78	40.394
MGP_NODShiLtJ_G0032842	9130019O22Rik	95	42.012	MGP_NODShiLtJ_G0023070	Zfp945	98	41.161
MGP_NODShiLtJ_G0032842	9130019O22Rik	78	44.724	MGP_NODShiLtJ_G0031630	Zfp235	66	46.866
MGP_NODShiLtJ_G0032842	9130019O22Rik	72	45.283	MGP_NODShiLtJ_G0031636	Zfp61	54	45.283
MGP_NODShiLtJ_G0032842	9130019O22Rik	93	36.973	MGP_NODShiLtJ_G0031637	Zfp94	99	37.380
MGP_NODShiLtJ_G0032842	9130019O22Rik	95	45.455	MGP_NODShiLtJ_G0031634	Zfp108	99	45.455
MGP_NODShiLtJ_G0032842	9130019O22Rik	73	37.265	MGP_NODShiLtJ_G0033787	Zfp319	89	36.735
MGP_NODShiLtJ_G0032842	9130019O22Rik	72	39.394	MGP_NODShiLtJ_G0026748	Zfp64	74	39.394
MGP_NODShiLtJ_G0032842	9130019O22Rik	69	42.793	MGP_NODShiLtJ_G0020128	Zkscan4	54	41.949
MGP_NODShiLtJ_G0032842	9130019O22Rik	91	41.971	MGP_NODShiLtJ_G0020540	Zfp759	99	41.971
MGP_NODShiLtJ_G0032842	9130019O22Rik	70	38.550	MGP_NODShiLtJ_G0030639	Prdm5	77	38.550