EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0032844 (Gene tree)
Gene ID: -
Gene Symbol: E430018J23Rik
Alias: AI480612
Full Name: RIKEN cDNA E430018J23 gene
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 2669 bases
Position: chr7:142613565-142616233
Accession: 2141981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0086390	zf-C2H2	PF00096.26	1.8e-48	1	9
MGP_NODShiLtJ_P0086390	zf-C2H2	PF00096.26	1.8e-48	2	9
MGP_NODShiLtJ_P0086390	zf-C2H2	PF00096.26	1.8e-48	3	9
MGP_NODShiLtJ_P0086390	zf-C2H2	PF00096.26	1.8e-48	4	9
MGP_NODShiLtJ_P0086390	zf-C2H2	PF00096.26	1.8e-48	5	9
MGP_NODShiLtJ_P0086390	zf-C2H2	PF00096.26	1.8e-48	6	9
MGP_NODShiLtJ_P0086390	zf-C2H2	PF00096.26	1.8e-48	7	9
MGP_NODShiLtJ_P0086390	zf-C2H2	PF00096.26	1.8e-48	8	9
MGP_NODShiLtJ_P0086390	zf-C2H2	PF00096.26	1.8e-48	9	9
MGP_NODShiLtJ_P0086390	zf-met	PF12874.7	6.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0086390	-	2046	XM_006507163	MGP_NODShiLtJ_P0086390	461 (aa)	XP_006507226	D3Z3V4

Gene Model

Click here to download MGP_NODShiLtJ_G0032844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0032844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0032844	E430018J23Rik	85	45.349	MGP_NODShiLtJ_G0020555	Zfp748	99	45.349
MGP_NODShiLtJ_G0032844	E430018J23Rik	74	47.809	MGP_NODShiLtJ_G0031629	Zfp112	63	47.809
MGP_NODShiLtJ_G0032844	E430018J23Rik	97	73.885	MGP_NODShiLtJ_G0032842	9130019O22Rik	100	73.885
MGP_NODShiLtJ_G0032844	E430018J23Rik	100	100.000	MGP_NODShiLtJ_G0032843	-	100	100.000
MGP_NODShiLtJ_G0032844	E430018J23Rik	60	47.511	MGP_NODShiLtJ_G0032840	Zfp768	50	47.321
MGP_NODShiLtJ_G0032844	E430018J23Rik	69	36.765	MGP_NODShiLtJ_G0033787	Zfp319	93	39.245
MGP_NODShiLtJ_G0032844	E430018J23Rik	79	45.070	MGP_NODShiLtJ_G0031938	Zfp715	74	45.070
MGP_NODShiLtJ_G0032844	E430018J23Rik	91	47.445	MGP_NODShiLtJ_G0023050	Zfp51	95	45.339
MGP_NODShiLtJ_G0032844	E430018J23Rik	67	47.967	MGP_NODShiLtJ_G0031804	Zfp420	98	47.967
MGP_NODShiLtJ_G0032844	E430018J23Rik	90	50.382	MGP_NODShiLtJ_G0021849	Zfp251	94	50.382
MGP_NODShiLtJ_G0032844	E430018J23Rik	86	39.583	MGP_NODShiLtJ_G0018250	Zfp867	95	39.583
MGP_NODShiLtJ_G0032844	E430018J23Rik	61	44.762	MGP_NODShiLtJ_G0030504	Repin1	92	44.340
MGP_NODShiLtJ_G0032844	E430018J23Rik	57	44.086	MGP_NODShiLtJ_G0031667	Zfp574	71	38.961
MGP_NODShiLtJ_G0032844	E430018J23Rik	89	47.895	MGP_NODShiLtJ_G0026280	Zfp661	94	42.286
MGP_NODShiLtJ_G0032844	E430018J23Rik	62	45.000	MGP_NODShiLtJ_G0029310	Zbtb49	64	47.945
MGP_NODShiLtJ_G0032844	E430018J23Rik	60	48.421	MGP_NODShiLtJ_G0031379	Zfp628	60	47.264
MGP_NODShiLtJ_G0032844	E430018J23Rik	54	38.421	MGP_NODShiLtJ_G0018837	Zfp652	51	32.808
MGP_NODShiLtJ_G0032844	E430018J23Rik	95	42.073	MGP_NODShiLtJ_G0023070	Zfp945	98	42.073
MGP_NODShiLtJ_G0032844	E430018J23Rik	64	43.254	MGP_NODShiLtJ_G0023077	Zscan10	79	43.254
MGP_NODShiLtJ_G0032844	E430018J23Rik	86	43.798	MGP_NODShiLtJ_G0033575	Zfp882	99	43.798
MGP_NODShiLtJ_G0032844	E430018J23Rik	86	44.000	MGP_NODShiLtJ_G0026710	Zfp334	99	44.000
MGP_NODShiLtJ_G0032844	E430018J23Rik	71	32.389	MGP_NODShiLtJ_G0026748	Zfp64	70	32.389
MGP_NODShiLtJ_G0032844	E430018J23Rik	60	35.593	MGP_NODShiLtJ_G0031387	Zfp865	72	35.593
MGP_NODShiLtJ_G0032844	E430018J23Rik	90	47.390	MGP_NODShiLtJ_G0020539	Rslcan18	82	47.390
MGP_NODShiLtJ_G0032844	E430018J23Rik	57	44.503	MGP_NODShiLtJ_G0030984	Zfp637	84	44.330
MGP_NODShiLtJ_G0032844	E430018J23Rik	71	37.838	MGP_NODShiLtJ_G0030639	Prdm5	74	37.838
MGP_NODShiLtJ_G0032844	E430018J23Rik	61	42.798	MGP_NODShiLtJ_G0018202	Zfp672	90	42.105
MGP_NODShiLtJ_G0032844	E430018J23Rik	86	35.381	MGP_NODShiLtJ_G0033947	Zfp1	98	35.381
MGP_NODShiLtJ_G0032844	E430018J23Rik	88	42.647	MGP_NODShiLtJ_G0020540	Zfp759	99	42.373
MGP_NODShiLtJ_G0032844	E430018J23Rik	62	45.299	MGP_NODShiLtJ_G0031634	Zfp108	70	45.299
MGP_NODShiLtJ_G0032844	E430018J23Rik	59	48.341	MGP_NODShiLtJ_G0031636	Zfp61	51	48.341
MGP_NODShiLtJ_G0032844	E430018J23Rik	85	46.119	MGP_NODShiLtJ_G0031637	Zfp94	96	46.119
MGP_NODShiLtJ_G0032844	E430018J23Rik	89	48.879	MGP_NODShiLtJ_G0031630	Zfp235	99	48.879
MGP_NODShiLtJ_G0032844	E430018J23Rik	58	42.177	MGP_NODShiLtJ_G0024432	Zfp236	58	42.177
MGP_NODShiLtJ_G0032844	E430018J23Rik	92	41.985	MGP_NODShiLtJ_G0023048	Zfp677	99	41.985
MGP_NODShiLtJ_G0032844	E430018J23Rik	59	41.667	MGP_NODShiLtJ_G0020128	Zkscan4	54	43.363
MGP_NODShiLtJ_G0032844	E430018J23Rik	89	45.385	MGP_NODShiLtJ_G0018107	Zfp454	99	44.019
MGP_NODShiLtJ_G0032844	E430018J23Rik	89	50.000	MGP_NODShiLtJ_G0034217	Zfp26	89	50.000