EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0086640	RRM_1	PF00076.22	2.2e-63	1	3
MGP_NODShiLtJ_P0086640	RRM_1	PF00076.22	2.2e-63	2	3
MGP_NODShiLtJ_P0086640	RRM_1	PF00076.22	2.2e-63	3	3
MGP_NODShiLtJ_P0086643	RRM_1	PF00076.22	2.2e-63	1	3
MGP_NODShiLtJ_P0086643	RRM_1	PF00076.22	2.2e-63	2	3
MGP_NODShiLtJ_P0086643	RRM_1	PF00076.22	2.2e-63	3	3
MGP_NODShiLtJ_P0086637	RRM_1	PF00076.22	3.1e-60	1	3
MGP_NODShiLtJ_P0086637	RRM_1	PF00076.22	3.1e-60	2	3
MGP_NODShiLtJ_P0086637	RRM_1	PF00076.22	3.1e-60	3	3
MGP_NODShiLtJ_P0086639	RRM_1	PF00076.22	7.6e-51	1	3
MGP_NODShiLtJ_P0086639	RRM_1	PF00076.22	7.6e-51	2	3
MGP_NODShiLtJ_P0086639	RRM_1	PF00076.22	7.6e-51	3	3
MGP_NODShiLtJ_P0086645	RRM_1	PF00076.22	1.8e-26	1	2
MGP_NODShiLtJ_P0086645	RRM_1	PF00076.22	1.8e-26	2	2
MGP_NODShiLtJ_P0086642	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0086647	-	560	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0086646	-	784	-	MGP_NODShiLtJ_P0086646	41 (aa)	-	-
MGP_NODShiLtJ_T0086645	-	1344	-	MGP_NODShiLtJ_P0086645	244 (aa)	-	-
MGP_NODShiLtJ_T0086644	-	2204	-	MGP_NODShiLtJ_P0086644	123 (aa)	-	-
MGP_NODShiLtJ_T0086643	-	1580	-	MGP_NODShiLtJ_P0086643	375 (aa)	-	-
MGP_NODShiLtJ_T0086642	-	562	-	MGP_NODShiLtJ_P0086642	107 (aa)	-	-
MGP_NODShiLtJ_T0086641	-	953	-	MGP_NODShiLtJ_P0086641	106 (aa)	-	-
MGP_NODShiLtJ_T0086640	-	2033	-	MGP_NODShiLtJ_P0086640	375 (aa)	-	-
MGP_NODShiLtJ_T0086638	-	4265	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0086639	-	2835	-	MGP_NODShiLtJ_P0086639	336 (aa)	-	-
MGP_NODShiLtJ_T0086649	-	674	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0086648	-	735	-	MGP_NODShiLtJ_P0086648	128 (aa)	-	-
MGP_NODShiLtJ_T0086637	-	4450	XM_006507570	MGP_NODShiLtJ_P0086637	392 (aa)	XP_006507633	P70318

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0032890	Tial1	100	87.440	MGP_NODShiLtJ_G0030780	Tia1	97	86.992
MGP_NODShiLtJ_G0032890	Tial1	80	32.000	MGP_NODShiLtJ_G0027144	Rbm46	52	30.000
MGP_NODShiLtJ_G0032890	Tial1	65	31.481	MGP_NODShiLtJ_G0025170	Celf2	61	34.177
MGP_NODShiLtJ_G0032890	Tial1	81	31.111	MGP_NODShiLtJ_G0019327	Rbfox3	53	31.868
MGP_NODShiLtJ_G0032890	Tial1	80	33.019	MGP_NODShiLtJ_G0028672	Trnau1ap	60	32.386
MGP_NODShiLtJ_G0032890	Tial1	67	30.769	MGP_NODShiLtJ_G0033137	Elavl1	95	30.769
MGP_NODShiLtJ_G0032890	Tial1	68	32.184	MGP_NODShiLtJ_G0022554	Ncbp2	71	33.333
MGP_NODShiLtJ_G0032890	Tial1	100	33.083	MGP_NODShiLtJ_G0021633	Pabpc1	50	34.783
MGP_NODShiLtJ_G0032890	Tial1	71	31.461	MGP_NODShiLtJ_G0035535	Rbmx	90	32.258
MGP_NODShiLtJ_G0032890	Tial1	53	32.143	MGP_NODShiLtJ_G0034700	Celf6	54	31.818
MGP_NODShiLtJ_G0032890	Tial1	72	34.615	MGP_NODShiLtJ_G0028254	Elavl2	93	34.615
MGP_NODShiLtJ_G0032890	Tial1	69	31.469	MGP_NODShiLtJ_G0029769	Msi1	56	41.379
MGP_NODShiLtJ_G0032890	Tial1	81	37.333	MGP_NODShiLtJ_G0027371	Celf3	70	34.091
MGP_NODShiLtJ_G0032890	Tial1	99	31.452	MGP_NODShiLtJ_G0027002	Pabpc4l	94	33.333
MGP_NODShiLtJ_G0032890	Tial1	67	40.244	MGP_NODShiLtJ_G0017347	Cirbp	85	40.244
MGP_NODShiLtJ_G0032890	Tial1	73	37.179	MGP_NODShiLtJ_G0034273	Elavl3	90	37.179
MGP_NODShiLtJ_G0032890	Tial1	98	34.921	MGP_NODShiLtJ_G0024199	Pabpc2	50	35.036
MGP_NODShiLtJ_G0032890	Tial1	100	30.233	MGP_NODShiLtJ_G0028543	Pabpc4	100	34.167
MGP_NODShiLtJ_G0032890	Tial1	73	35.897	MGP_NODShiLtJ_G0028383	Elavl4	88	35.897
MGP_NODShiLtJ_G0032890	Tial1	100	31.783	MGP_NODShiLtJ_G0022964	Pabpc6	56	34.014