EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0087668	RRM_5	PF13893.6	2.8e-10	1	2
MGP_NODShiLtJ_P0087668	RRM_5	PF13893.6	2.8e-10	2	2
MGP_NODShiLtJ_P0087668	RRM_1	PF00076.22	1.1e-61	1	3
MGP_NODShiLtJ_P0087668	RRM_1	PF00076.22	1.1e-61	2	3
MGP_NODShiLtJ_P0087668	RRM_1	PF00076.22	1.1e-61	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0087668	-	6030	XM_006508698	MGP_NODShiLtJ_P0087668	326 (aa)	XP_006508761	P70372

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0033137	Elavl1	95	33.553	MGP_NODShiLtJ_G0028543	Pabpc4	99	34.848
MGP_NODShiLtJ_G0033137	Elavl1	59	31.481	MGP_NODShiLtJ_G0028933	Tardbp	72	38.806
MGP_NODShiLtJ_G0033137	Elavl1	50	33.333	MGP_NODShiLtJ_G0018120	Hnrnpab	53	33.333
MGP_NODShiLtJ_G0033137	Elavl1	95	66.265	MGP_NODShiLtJ_G0034273	Elavl3	90	66.867
MGP_NODShiLtJ_G0033137	Elavl1	98	73.585	MGP_NODShiLtJ_G0028383	Elavl4	89	73.585
MGP_NODShiLtJ_G0033137	Elavl1	95	32.298	MGP_NODShiLtJ_G0030780	Tia1	99	31.579
MGP_NODShiLtJ_G0033137	Elavl1	91	30.464	MGP_NODShiLtJ_G0027002	Pabpc4l	94	30.464
MGP_NODShiLtJ_G0033137	Elavl1	75	33.333	MGP_NODShiLtJ_G0017347	Cirbp	82	33.333
MGP_NODShiLtJ_G0033137	Elavl1	81	43.210	MGP_NODShiLtJ_G0025170	Celf2	64	43.210
MGP_NODShiLtJ_G0033137	Elavl1	97	44.444	MGP_NODShiLtJ_G0034700	Celf6	57	44.444
MGP_NODShiLtJ_G0033137	Elavl1	94	76.375	MGP_NODShiLtJ_G0028254	Elavl2	89	76.375
MGP_NODShiLtJ_G0033137	Elavl1	51	34.177	MGP_NODShiLtJ_G0035535	Rbmx	85	34.177
MGP_NODShiLtJ_G0033137	Elavl1	95	32.450	MGP_NODShiLtJ_G0021633	Pabpc1	51	32.450
MGP_NODShiLtJ_G0033137	Elavl1	79	41.975	MGP_NODShiLtJ_G0017421	Celf5	59	41.975
MGP_NODShiLtJ_G0033137	Elavl1	95	44.444	MGP_NODShiLtJ_G0027371	Celf3	98	35.632
MGP_NODShiLtJ_G0033137	Elavl1	95	43.210	MGP_NODShiLtJ_G0024036	Celf4	73	36.232
MGP_NODShiLtJ_G0033137	Elavl1	83	45.679	MGP_NODShiLtJ_G0025961	Celf1	61	45.679
MGP_NODShiLtJ_G0033137	Elavl1	95	30.769	MGP_NODShiLtJ_G0032890	Tial1	67	30.769
MGP_NODShiLtJ_G0033137	Elavl1	74	32.000	MGP_NODShiLtJ_G0027441	Rbm8a	62	32.000
MGP_NODShiLtJ_G0033137	Elavl1	91	34.356	MGP_NODShiLtJ_G0035199	Rbms3	97	34.356