EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0033359 (Gene tree)
Gene ID: -
Gene Symbol: Cnot7
Alias: AU022737|CAF-1|Caf1|Pop2
Full Name: CCR4-NOT transcription complex%2C subunit 7
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 26626 bases
Position: chr8:42263426-42290051
Accession: 1298230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0088262	CAF1	PF04857.20	3.5e-22	1	2
MGP_NODShiLtJ_P0088262	CAF1	PF04857.20	3.5e-22	2	2
MGP_NODShiLtJ_P0088263	CAF1	PF04857.20	3.5e-22	1	2
MGP_NODShiLtJ_P0088263	CAF1	PF04857.20	3.5e-22	2	2
MGP_NODShiLtJ_P0088266	CAF1	PF04857.20	3.5e-22	1	2
MGP_NODShiLtJ_P0088266	CAF1	PF04857.20	3.5e-22	2	2
MGP_NODShiLtJ_P0088265	CAF1	PF04857.20	6.1e-19	1	2
MGP_NODShiLtJ_P0088265	CAF1	PF04857.20	6.1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0088267	-	679	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0088266	-	2982	-	MGP_NODShiLtJ_P0088266	285 (aa)	-	-
MGP_NODShiLtJ_T0088265	-	2462	-	MGP_NODShiLtJ_P0088265	248 (aa)	-	-
MGP_NODShiLtJ_T0088264	-	3832	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0088263	-	2542	-	MGP_NODShiLtJ_P0088263	285 (aa)	-	-
MGP_NODShiLtJ_T0088262	-	2616	XM_006509306	MGP_NODShiLtJ_P0088262	285 (aa)	XP_006509369	Q60809
MGP_NODShiLtJ_T0088268	-	840	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0088270	-	312	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0088271	-	726	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0088272	-	483	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0088273	-	406	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0033359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0033359's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0033359	Cnot7	99	76.596	MGP_NODShiLtJ_G0018195	Cnot8	97	76.596