EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0033504 (Gene tree)
Gene ID: -
Gene Symbol: Ddx49
Alias: R27090_2
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 12374 bases
Position: chr8:78520138-78532511
Accession: 2136689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0088776	ResIII	PF04851.15	4.2e-06	1	1
MGP_NODShiLtJ_P0088776	DEAD	PF00270.29	7.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0088780	-	1441	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0088778	-	599	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0088777	-	2163	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0088776	-	2137	-	MGP_NODShiLtJ_P0088776	480 (aa)	-	Q4FZF3
MGP_NODShiLtJ_T0088779	-	1107	-	MGP_NODShiLtJ_P0088779	354 (aa)	-	-
MGP_NODShiLtJ_T0088781	-	304	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0033504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0033504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0033504	Ddx49	93	34.897	MGP_NODShiLtJ_G0034865	Ddx43	60	34.913
MGP_NODShiLtJ_G0033504	Ddx49	95	33.616	MGP_NODShiLtJ_G0020774	Ddx4	52	33.687
MGP_NODShiLtJ_G0033504	Ddx49	97	38.177	MGP_NODShiLtJ_G0026724	Ddx27	59	33.696
MGP_NODShiLtJ_G0033504	Ddx49	55	32.642	MGP_NODShiLtJ_G0030700	Gm8994	54	32.642
MGP_NODShiLtJ_G0033504	Ddx49	92	49.296	MGP_NODShiLtJ_G0016284	Ddx18	57	49.296
MGP_NODShiLtJ_G0033504	Ddx49	91	36.826	MGP_NODShiLtJ_G0019166	Ddx5	71	35.676
MGP_NODShiLtJ_G0033504	Ddx49	91	39.521	MGP_NODShiLtJ_G0021907	Ddx17	56	37.903
MGP_NODShiLtJ_G0033504	Ddx49	98	32.741	MGP_NODShiLtJ_G0025371	Ddx31	63	31.136
MGP_NODShiLtJ_G0033504	Ddx49	92	32.402	MGP_NODShiLtJ_G0033877	Ddx28	68	31.649
MGP_NODShiLtJ_G0033504	Ddx49	96	40.909	MGP_NODShiLtJ_G0019462	Ddx1	63	40.909
MGP_NODShiLtJ_G0033504	Ddx49	90	37.500	MGP_NODShiLtJ_G0016790	D1Pas1	55	36.316
MGP_NODShiLtJ_G0033504	Ddx49	59	33.175	MGP_NODShiLtJ_G0017875	Ddx56	94	32.627
MGP_NODShiLtJ_G0033504	Ddx49	97	33.333	MGP_NODShiLtJ_G0033644	Ddx39	87	33.156
MGP_NODShiLtJ_G0033504	Ddx49	97	49.271	MGP_NODShiLtJ_G0031223	Ddx47	95	45.824
MGP_NODShiLtJ_G0033504	Ddx49	76	30.081	MGP_NODShiLtJ_G0018712	Ddx52	61	30.081
MGP_NODShiLtJ_G0033504	Ddx49	95	31.953	MGP_NODShiLtJ_G0019335	Eif4a3	91	32.190
MGP_NODShiLtJ_G0033504	Ddx49	93	30.175	MGP_NODShiLtJ_G0029692	Ddx51	71	30.573
MGP_NODShiLtJ_G0033504	Ddx49	95	33.138	MGP_NODShiLtJ_G0016413	Ddx59	58	32.609
MGP_NODShiLtJ_G0033504	Ddx49	90	36.919	MGP_NODShiLtJ_G0035370	Ddx3x	55	35.789
MGP_NODShiLtJ_G0033504	Ddx49	95	32.743	MGP_NODShiLtJ_G0034513	Ddx6	75	33.333
MGP_NODShiLtJ_G0033504	Ddx49	94	32.239	MGP_NODShiLtJ_G0022507	Eif4a2	92	32.546
MGP_NODShiLtJ_G0033504	Ddx49	97	33.046	MGP_NODShiLtJ_G0023455	Ddx39b	86	32.891
MGP_NODShiLtJ_G0033504	Ddx49	92	33.238	MGP_NODShiLtJ_G0029900	Ddx55	56	33.056
MGP_NODShiLtJ_G0033504	Ddx49	55	32.642	MGP_NODShiLtJ_G0030699	Gm5580	54	32.642
MGP_NODShiLtJ_G0033504	Ddx49	96	33.333	MGP_NODShiLtJ_G0020442	Ddx41	62	32.921
MGP_NODShiLtJ_G0033504	Ddx49	94	32.440	MGP_NODShiLtJ_G0018394	Eif4a1	92	32.808