EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0033947 (Gene tree)
Gene ID: -
Gene Symbol: Zfp1
Alias: Fnp-1|Zfp-1|mkr-1
Full Name: zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 39938 bases
Position: chr8:125367544-125407481
Accession: 99154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0090119	zf-C2H2	PF00096.26	2.1e-51	1	8
MGP_NODShiLtJ_P0090119	zf-C2H2	PF00096.26	2.1e-51	2	8
MGP_NODShiLtJ_P0090119	zf-C2H2	PF00096.26	2.1e-51	3	8
MGP_NODShiLtJ_P0090119	zf-C2H2	PF00096.26	2.1e-51	4	8
MGP_NODShiLtJ_P0090119	zf-C2H2	PF00096.26	2.1e-51	5	8
MGP_NODShiLtJ_P0090119	zf-C2H2	PF00096.26	2.1e-51	6	8
MGP_NODShiLtJ_P0090119	zf-C2H2	PF00096.26	2.1e-51	7	8
MGP_NODShiLtJ_P0090119	zf-C2H2	PF00096.26	2.1e-51	8	8
MGP_NODShiLtJ_P0090119	zf-met	PF12874.7	3.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0090119	-	1871	XM_011248348	MGP_NODShiLtJ_P0090119	403 (aa)	XP_011246650	Q3UI68

Gene Model

Click here to download MGP_NODShiLtJ_G0033947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0033947's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0033947	Zfp1	67	42.083	MGP_NODShiLtJ_G0028853	Zbtb17	54	46.512
MGP_NODShiLtJ_G0033947	Zfp1	99	47.926	MGP_NODShiLtJ_G0023050	Zfp51	94	47.926
MGP_NODShiLtJ_G0033947	Zfp1	98	35.381	MGP_NODShiLtJ_G0032844	E430018J23Rik	86	35.381
MGP_NODShiLtJ_G0033947	Zfp1	80	52.252	MGP_NODShiLtJ_G0032840	Zfp768	51	52.018
MGP_NODShiLtJ_G0033947	Zfp1	98	35.381	MGP_NODShiLtJ_G0032843	-	86	35.381
MGP_NODShiLtJ_G0033947	Zfp1	99	45.161	MGP_NODShiLtJ_G0032842	9130019O22Rik	90	45.161
MGP_NODShiLtJ_G0033947	Zfp1	98	49.145	MGP_NODShiLtJ_G0020555	Zfp748	99	49.145
MGP_NODShiLtJ_G0033947	Zfp1	99	40.144	MGP_NODShiLtJ_G0018250	Zfp867	95	39.600
MGP_NODShiLtJ_G0033947	Zfp1	77	57.042	MGP_NODShiLtJ_G0030984	Zfp637	91	57.042
MGP_NODShiLtJ_G0033947	Zfp1	63	49.485	MGP_NODShiLtJ_G0029310	Zbtb49	76	48.611
MGP_NODShiLtJ_G0033947	Zfp1	99	42.769	MGP_NODShiLtJ_G0033575	Zfp882	99	45.349
MGP_NODShiLtJ_G0033947	Zfp1	98	51.440	MGP_NODShiLtJ_G0031938	Zfp715	95	51.440
MGP_NODShiLtJ_G0033947	Zfp1	99	45.076	MGP_NODShiLtJ_G0023048	Zfp677	99	52.263
MGP_NODShiLtJ_G0033947	Zfp1	99	48.548	MGP_NODShiLtJ_G0020539	Rslcan18	86	48.548
MGP_NODShiLtJ_G0033947	Zfp1	67	45.714	MGP_NODShiLtJ_G0024432	Zfp236	60	45.652
MGP_NODShiLtJ_G0033947	Zfp1	64	43.137	MGP_NODShiLtJ_G0026748	Zfp64	70	43.137
MGP_NODShiLtJ_G0033947	Zfp1	98	38.214	MGP_NODShiLtJ_G0020540	Zfp759	99	38.214
MGP_NODShiLtJ_G0033947	Zfp1	100	42.617	MGP_NODShiLtJ_G0026710	Zfp334	99	54.028
MGP_NODShiLtJ_G0033947	Zfp1	99	52.489	MGP_NODShiLtJ_G0023070	Zfp945	99	52.489
MGP_NODShiLtJ_G0033947	Zfp1	79	46.460	MGP_NODShiLtJ_G0023077	Zscan10	80	46.053
MGP_NODShiLtJ_G0033947	Zfp1	99	51.029	MGP_NODShiLtJ_G0034217	Zfp26	89	51.029
MGP_NODShiLtJ_G0033947	Zfp1	67	46.559	MGP_NODShiLtJ_G0018202	Zfp672	90	46.559
MGP_NODShiLtJ_G0033947	Zfp1	80	57.078	MGP_NODShiLtJ_G0031629	Zfp112	72	57.078
MGP_NODShiLtJ_G0033947	Zfp1	67	40.167	MGP_NODShiLtJ_G0030639	Prdm5	67	50.847
MGP_NODShiLtJ_G0033947	Zfp1	63	42.424	MGP_NODShiLtJ_G0030504	Repin1	92	42.424
MGP_NODShiLtJ_G0033947	Zfp1	99	48.828	MGP_NODShiLtJ_G0018107	Zfp454	98	48.828
MGP_NODShiLtJ_G0033947	Zfp1	98	47.059	MGP_NODShiLtJ_G0021849	Zfp251	94	47.059
MGP_NODShiLtJ_G0033947	Zfp1	98	41.429	MGP_NODShiLtJ_G0026280	Zfp661	96	41.429
MGP_NODShiLtJ_G0033947	Zfp1	91	55.319	MGP_NODShiLtJ_G0031630	Zfp235	80	55.319
MGP_NODShiLtJ_G0033947	Zfp1	98	50.185	MGP_NODShiLtJ_G0031637	Zfp94	96	50.185
MGP_NODShiLtJ_G0033947	Zfp1	78	61.905	MGP_NODShiLtJ_G0031636	Zfp61	59	61.905
MGP_NODShiLtJ_G0033947	Zfp1	100	49.035	MGP_NODShiLtJ_G0031634	Zfp108	99	50.862
MGP_NODShiLtJ_G0033947	Zfp1	75	40.183	MGP_NODShiLtJ_G0033787	Zfp319	90	40.183
MGP_NODShiLtJ_G0033947	Zfp1	78	57.692	MGP_NODShiLtJ_G0031804	Zfp420	99	57.692
MGP_NODShiLtJ_G0033947	Zfp1	79	40.594	MGP_NODShiLtJ_G0031667	Zfp574	71	40.594
MGP_NODShiLtJ_G0033947	Zfp1	60	46.429	MGP_NODShiLtJ_G0031379	Zfp628	60	46.073
MGP_NODShiLtJ_G0033947	Zfp1	75	54.491	MGP_NODShiLtJ_G0020128	Zkscan4	53	54.491
MGP_NODShiLtJ_G0033947	Zfp1	67	39.791	MGP_NODShiLtJ_G0031387	Zfp865	80	39.286