EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0034030 (Gene tree)
Gene ID: -
Gene Symbol: Snai3
Alias: AI643946|Smuc|Snail-related gene from muscle cells|Zfp293
Full Name: snail family zinc finger 3
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 6507 bases
Position: chr8:137162743-137169249
Accession: 1353563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0090388	zf-C2H2	PF00096.26	3.1e-24	1	4
MGP_NODShiLtJ_P0090388	zf-C2H2	PF00096.26	3.1e-24	2	4
MGP_NODShiLtJ_P0090388	zf-C2H2	PF00096.26	3.1e-24	3	4
MGP_NODShiLtJ_P0090388	zf-C2H2	PF00096.26	3.1e-24	4	4
MGP_NODShiLtJ_P0090388	zf-met	PF12874.7	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0090388	-	1589	XM_006531074	MGP_NODShiLtJ_P0090388	287 (aa)	XP_006531137	Q9QY31

Gene Model

Click here to download MGP_NODShiLtJ_G0034030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0034030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0034030	Snai3	68	47.297	MGP_NODShiLtJ_G0024432	Zfp236	59	36.242
MGP_NODShiLtJ_G0034030	Snai3	55	42.336	MGP_NODShiLtJ_G0030639	Prdm5	68	48.544
MGP_NODShiLtJ_G0034030	Snai3	100	40.667	MGP_NODShiLtJ_G0026733	Snai1	99	41.333
MGP_NODShiLtJ_G0034030	Snai3	99	46.552	MGP_NODShiLtJ_G0022379	Snai2	99	46.599