EuRBPDB

Description

Ensembl ID: MGP_NODShiLtJ_G0034258 (Gene tree)
Gene ID: -
Gene Symbol: Smarca4
Alias: Baf190a|Brg1|HP1-BP72|SNF2beta|SW1/SNF|Snf2b|Snf2l4|b2b508.1Clo|b2b692Clo
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 100868 bases
Position: chr9:21953597-22054464
Accession: 88192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0091026	ResIII	PF04851.15	2.2e-09	1	1
MGP_NODShiLtJ_P0091025	ResIII	PF04851.15	3.1e-09	1	1
MGP_NODShiLtJ_P0091023	ResIII	PF04851.15	3.1e-09	1	1
MGP_NODShiLtJ_P0091024	ResIII	PF04851.15	3.1e-09	1	1
MGP_NODShiLtJ_P0091026	BRK	PF07533.16	1.8e-17	1	1
MGP_NODShiLtJ_P0091025	BRK	PF07533.16	2.4e-17	1	1
MGP_NODShiLtJ_P0091023	BRK	PF07533.16	2.4e-17	1	1
MGP_NODShiLtJ_P0091024	BRK	PF07533.16	2.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0091023	-	6359	XM_006510117	MGP_NODShiLtJ_P0091023	1614 (aa)	XP_006510180	Q3TKT4
MGP_NODShiLtJ_T0091026	-	3800	-	MGP_NODShiLtJ_P0091026	1266 (aa)	-	-
MGP_NODShiLtJ_T0091025	-	5405	-	MGP_NODShiLtJ_P0091025	1613 (aa)	-	-
MGP_NODShiLtJ_T0091024	-	6346	-	MGP_NODShiLtJ_P0091024	1614 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0034258	Smarca4	92	79.726	MGP_NODShiLtJ_G0024836	Smarca2	96	73.829