EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0034513 (Gene tree)
Gene ID: -
Gene Symbol: Ddx6
Alias: 1110001P04Rik|C430015D01Rik|E230023J21Rik|HLR2|Hlr2|Rck|mRCK/P54|p54|rck
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 43304 bases
Position: chr9:47844174-47887477
Accession: 104976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0091609	DEAD	PF00270.29	2.6e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0091609	-	4456	-	MGP_NODShiLtJ_P0091609	483 (aa)	-	-
MGP_NODShiLtJ_T0091608	-	2962	XM_011242391	MGP_NODShiLtJ_P0091608	532 (aa)	XP_011240693	P54823

Gene Model

Click here to download MGP_NODShiLtJ_G0034513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0034513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0034513	Ddx6	74	31.234	MGP_NODShiLtJ_G0029900	Ddx55	61	31.234
MGP_NODShiLtJ_G0034513	Ddx6	77	31.771	MGP_NODShiLtJ_G0034865	Ddx43	59	31.771
MGP_NODShiLtJ_G0034513	Ddx6	78	32.987	MGP_NODShiLtJ_G0031223	Ddx47	93	31.759
MGP_NODShiLtJ_G0034513	Ddx6	80	30.256	MGP_NODShiLtJ_G0016413	Ddx59	62	30.256
MGP_NODShiLtJ_G0034513	Ddx6	69	40.678	MGP_NODShiLtJ_G0019462	Ddx1	56	40.678
MGP_NODShiLtJ_G0034513	Ddx6	67	31.024	MGP_NODShiLtJ_G0019166	Ddx5	65	31.024
MGP_NODShiLtJ_G0034513	Ddx6	74	33.784	MGP_NODShiLtJ_G0034335	Ddx25	78	34.555
MGP_NODShiLtJ_G0034513	Ddx6	80	31.735	MGP_NODShiLtJ_G0033936	Ddx19b	79	35.263
MGP_NODShiLtJ_G0034513	Ddx6	77	31.159	MGP_NODShiLtJ_G0022133	Ddx23	51	31.175
MGP_NODShiLtJ_G0034513	Ddx6	74	30.923	MGP_NODShiLtJ_G0020774	Ddx4	51	32.782
MGP_NODShiLtJ_G0034513	Ddx6	72	30.256	MGP_NODShiLtJ_G0016790	D1Pas1	54	32.402
MGP_NODShiLtJ_G0034513	Ddx6	76	38.710	MGP_NODShiLtJ_G0018394	Eif4a1	91	38.710
MGP_NODShiLtJ_G0034513	Ddx6	76	31.915	MGP_NODShiLtJ_G0018712	Ddx52	63	31.915
MGP_NODShiLtJ_G0034513	Ddx6	76	38.441	MGP_NODShiLtJ_G0022507	Eif4a2	91	38.441
MGP_NODShiLtJ_G0034513	Ddx6	74	30.894	MGP_NODShiLtJ_G0021907	Ddx17	58	30.971
MGP_NODShiLtJ_G0034513	Ddx6	71	31.742	MGP_NODShiLtJ_G0020442	Ddx41	57	32.022
MGP_NODShiLtJ_G0034513	Ddx6	79	35.659	MGP_NODShiLtJ_G0023455	Ddx39b	90	35.659
MGP_NODShiLtJ_G0034513	Ddx6	82	34.750	MGP_NODShiLtJ_G0033644	Ddx39	96	34.223
MGP_NODShiLtJ_G0034513	Ddx6	74	30.025	MGP_NODShiLtJ_G0017875	Ddx56	83	33.981
MGP_NODShiLtJ_G0034513	Ddx6	78	37.566	MGP_NODShiLtJ_G0019335	Eif4a3	91	37.566
MGP_NODShiLtJ_G0034513	Ddx6	78	33.419	MGP_NODShiLtJ_G0027535	Ddx20	50	32.767
MGP_NODShiLtJ_G0034513	Ddx6	69	31.755	MGP_NODShiLtJ_G0035370	Ddx3x	54	31.755
MGP_NODShiLtJ_G0034513	Ddx6	75	33.333	MGP_NODShiLtJ_G0033504	Ddx49	95	32.743