EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0034700 (Gene tree)
Gene ID: -
Gene Symbol: Celf6
Alias: 6330569O16Rik|Brunol6
Full Name: CUGBP%2C Elav-like family member 6
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 31800 bases
Position: chr9:64139457-64171256
Accession: 1923433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0092215	RRM_1	PF00076.22	2.1e-51	1	3
MGP_NODShiLtJ_P0092215	RRM_1	PF00076.22	2.1e-51	2	3
MGP_NODShiLtJ_P0092215	RRM_1	PF00076.22	2.1e-51	3	3
MGP_NODShiLtJ_P0092213	RRM_1	PF00076.22	2.6e-51	1	3
MGP_NODShiLtJ_P0092213	RRM_1	PF00076.22	2.6e-51	2	3
MGP_NODShiLtJ_P0092213	RRM_1	PF00076.22	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0092215	-	1758	-	MGP_NODShiLtJ_P0092215	460 (aa)	-	-
MGP_NODShiLtJ_T0092214	-	2898	-	MGP_NODShiLtJ_P0092214	162 (aa)	-	-
MGP_NODShiLtJ_T0092217	-	591	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0092216	-	449	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0092213	-	2947	-	MGP_NODShiLtJ_P0092213	481 (aa)	-	-
MGP_NODShiLtJ_T0092212	-	3061	XM_006511540	MGP_NODShiLtJ_P0092212	182 (aa)	XP_006511603	Q7TN33

Gene Model

Click here to download MGP_NODShiLtJ_G0034700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0034700's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0034700	Celf6	62	32.955	MGP_NODShiLtJ_G0030780	Tia1	85	36.000
MGP_NODShiLtJ_G0034700	Celf6	54	35.802	MGP_NODShiLtJ_G0017710	Rbms2	56	35.802
MGP_NODShiLtJ_G0034700	Celf6	68	37.113	MGP_NODShiLtJ_G0028543	Pabpc4	50	37.113
MGP_NODShiLtJ_G0034700	Celf6	91	45.549	MGP_NODShiLtJ_G0025961	Celf1	98	45.135
MGP_NODShiLtJ_G0034700	Celf6	66	32.500	MGP_NODShiLtJ_G0018120	Hnrnpab	65	31.414
MGP_NODShiLtJ_G0034700	Celf6	89	37.037	MGP_NODShiLtJ_G0028254	Elavl2	78	40.741
MGP_NODShiLtJ_G0034700	Celf6	51	34.483	MGP_NODShiLtJ_G0035822	Pabpc5	63	34.483
MGP_NODShiLtJ_G0034700	Celf6	75	84.783	MGP_NODShiLtJ_G0017421	Celf5	100	66.443
MGP_NODShiLtJ_G0034700	Celf6	73	39.062	MGP_NODShiLtJ_G0022964	Pabpc6	64	39.062
MGP_NODShiLtJ_G0034700	Celf6	75	85.526	MGP_NODShiLtJ_G0027371	Celf3	81	87.368
MGP_NODShiLtJ_G0034700	Celf6	79	31.250	MGP_NODShiLtJ_G0030538	Hnrnpa2b1	66	32.143
MGP_NODShiLtJ_G0034700	Celf6	52	42.105	MGP_NODShiLtJ_G0035199	Rbms3	82	42.105
MGP_NODShiLtJ_G0034700	Celf6	91	45.567	MGP_NODShiLtJ_G0025170	Celf2	79	80.952
MGP_NODShiLtJ_G0034700	Celf6	54	31.818	MGP_NODShiLtJ_G0032890	Tial1	53	32.143
MGP_NODShiLtJ_G0034700	Celf6	57	42.308	MGP_NODShiLtJ_G0034273	Elavl3	80	41.975
MGP_NODShiLtJ_G0034700	Celf6	95	35.802	MGP_NODShiLtJ_G0028383	Elavl4	85	40.741
MGP_NODShiLtJ_G0034700	Celf6	100	67.200	MGP_NODShiLtJ_G0024036	Celf4	99	67.066
MGP_NODShiLtJ_G0034700	Celf6	57	44.444	MGP_NODShiLtJ_G0033137	Elavl1	97	44.444