EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0034740 (Gene tree)
Gene ID: -
Gene Symbol: Rab11a
Alias: Rab11|Rab11A
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 27458 bases
Position: chr9:69714631-69742088
Accession: 1858202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0092392	MMR_HSR1	PF01926.23	2.3e-07	1	1
MGP_NODShiLtJ_P0092393	MMR_HSR1	PF01926.23	2.5e-07	1	1
MGP_NODShiLtJ_P0092387	MMR_HSR1	PF01926.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0092390	-	500	-	MGP_NODShiLtJ_P0092390	86 (aa)	-	-
MGP_NODShiLtJ_T0092391	-	397	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0092392	-	462	-	MGP_NODShiLtJ_P0092392	153 (aa)	-	-
MGP_NODShiLtJ_T0092393	-	595	-	MGP_NODShiLtJ_P0092393	155 (aa)	-	-
MGP_NODShiLtJ_T0092394	-	695	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0092387	-	6120	-	MGP_NODShiLtJ_P0092387	216 (aa)	-	P62492
MGP_NODShiLtJ_T0092389	-	603	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0092388	-	726	-	MGP_NODShiLtJ_P0092388	86 (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0034740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0034740's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0034740	Rab11a	91	56.835	MGP_NODShiLtJ_G0027854	Rab2a	81	54.971
MGP_NODShiLtJ_G0034740	Rab11a	87	38.686	MGP_NODShiLtJ_G0030810	Rab7	91	45.833
MGP_NODShiLtJ_G0034740	Rab11a	93	41.379	MGP_NODShiLtJ_G0027010	Rab33b	85	37.799
MGP_NODShiLtJ_G0034740	Rab11a	79	39.669	MGP_NODShiLtJ_G0031397	Rasl2-9	70	36.364
MGP_NODShiLtJ_G0034740	Rab11a	88	48.889	MGP_NODShiLtJ_G0017738	Rab5b	75	47.205
MGP_NODShiLtJ_G0034740	Rab11a	75	40.000	MGP_NODShiLtJ_G0022069	Rabl2	67	37.908
MGP_NODShiLtJ_G0034740	Rab11a	90	43.066	MGP_NODShiLtJ_G0026777	Rab22a	81	42.038
MGP_NODShiLtJ_G0034740	Rab11a	91	56.115	MGP_NODShiLtJ_G0021129	Rab2b	95	51.366
MGP_NODShiLtJ_G0034740	Rab11a	95	54.110	MGP_NODShiLtJ_G0025488	Rab14	97	54.422
MGP_NODShiLtJ_G0034740	Rab11a	78	31.746	MGP_NODShiLtJ_G0019557	Arl4a	60	31.746
MGP_NODShiLtJ_G0034740	Rab11a	100	96.078	MGP_NODShiLtJ_G0023355	Rab11b	100	90.367
MGP_NODShiLtJ_G0034740	Rab11a	88	48.148	MGP_NODShiLtJ_G0023711	Rab5a	91	41.951
MGP_NODShiLtJ_G0034740	Rab11a	81	31.746	MGP_NODShiLtJ_G0034970	Mras	85	32.768
MGP_NODShiLtJ_G0034740	Rab11a	94	39.423	MGP_NODShiLtJ_G0036041	Rab9	97	39.423
MGP_NODShiLtJ_G0034740	Rab11a	68	30.065	MGP_NODShiLtJ_G0016389	Arl8a	77	30.065
MGP_NODShiLtJ_G0034740	Rab11a	100	50.000	MGP_NODShiLtJ_G0017921	Rab1a	85	52.299
MGP_NODShiLtJ_G0034740	Rab11a	90	40.426	MGP_NODShiLtJ_G0035482	Rab33a	74	39.665
MGP_NODShiLtJ_G0034740	Rab11a	88	49.630	MGP_NODShiLtJ_G0019020	Rab5c	90	41.262
MGP_NODShiLtJ_G0034740	Rab11a	89	43.885	MGP_NODShiLtJ_G0019228	Rab37	77	45.181
MGP_NODShiLtJ_G0034740	Rab11a	97	52.201	MGP_NODShiLtJ_G0024523	Rab1b	84	55.357
MGP_NODShiLtJ_G0034740	Rab11a	89	42.143	MGP_NODShiLtJ_G0035888	Rab9b	86	41.040
MGP_NODShiLtJ_G0034740	Rab11a	74	30.303	MGP_NODShiLtJ_G0019419	Dnajc27	60	30.303
MGP_NODShiLtJ_G0034740	Rab11a	92	34.752	MGP_NODShiLtJ_G0015768	Rab23	80	32.984
MGP_NODShiLtJ_G0034740	Rab11a	91	46.763	MGP_NODShiLtJ_G0019721	Rab15	93	40.887
MGP_NODShiLtJ_G0034740	Rab11a	84	38.281	MGP_NODShiLtJ_G0032382	Rab6a	84	35.955
MGP_NODShiLtJ_G0034740	Rab11a	88	35.821	MGP_NODShiLtJ_G0034993	Rab6b	77	35.404
MGP_NODShiLtJ_G0034740	Rab11a	86	34.586	MGP_NODShiLtJ_G0029158	Rheb	89	32.927
MGP_NODShiLtJ_G0034740	Rab11a	81	34.921	MGP_NODShiLtJ_G0033021	Hras	85	37.654
MGP_NODShiLtJ_G0034740	Rab11a	94	35.780	MGP_NODShiLtJ_G0017209	Rab36	79	35.780
MGP_NODShiLtJ_G0034740	Rab11a	81	34.127	MGP_NODShiLtJ_G0031291	Kras	87	37.725
MGP_NODShiLtJ_G0034740	Rab11a	91	44.604	MGP_NODShiLtJ_G0032323	Rab30	97	37.981
MGP_NODShiLtJ_G0034740	Rab11a	95	70.748	MGP_NODShiLtJ_G0027215	Rab25	99	62.150
MGP_NODShiLtJ_G0034740	Rab11a	93	42.254	MGP_NODShiLtJ_G0023800	Rab31	86	41.071
MGP_NODShiLtJ_G0034740	Rab11a	90	43.796	MGP_NODShiLtJ_G0023809	Rab12	70	37.799
MGP_NODShiLtJ_G0034740	Rab11a	88	49.265	MGP_NODShiLtJ_G0035647	Rab39b	82	46.857
MGP_NODShiLtJ_G0034740	Rab11a	76	31.667	MGP_NODShiLtJ_G0019063	Arl4d	58	31.667
MGP_NODShiLtJ_G0034740	Rab11a	88	31.293	MGP_NODShiLtJ_G0030188	Rasl11a	60	31.293
MGP_NODShiLtJ_G0034740	Rab11a	81	34.921	MGP_NODShiLtJ_G0027505	Nras	95	37.931