EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0034865 (Gene tree)
Gene ID: -
Gene Symbol: Ddx43
Alias: ENSMUSG00000070291|OTTMUSG00000019690
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 39502 bases
Position: chr9:85064222-85103723
Accession: 3642857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0092894	KH_1	PF00013.29	4.5e-12	1	1
MGP_NODShiLtJ_P0092894	DEAD	PF00270.29	2.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0092894	-	2207	-	MGP_NODShiLtJ_P0092894	646 (aa)	-	D3Z6P9

Gene Model

Click here to download MGP_NODShiLtJ_G0034865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0034865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0034865	Ddx43	54	33.799	MGP_NODShiLtJ_G0017163	Ddx50	53	33.799
MGP_NODShiLtJ_G0034865	Ddx43	59	35.678	MGP_NODShiLtJ_G0031223	Ddx47	91	34.218
MGP_NODShiLtJ_G0034865	Ddx43	63	40.757	MGP_NODShiLtJ_G0022133	Ddx23	54	40.757
MGP_NODShiLtJ_G0034865	Ddx43	59	31.771	MGP_NODShiLtJ_G0034513	Ddx6	77	31.771
MGP_NODShiLtJ_G0034865	Ddx43	60	40.000	MGP_NODShiLtJ_G0020774	Ddx4	56	40.000
MGP_NODShiLtJ_G0034865	Ddx43	64	36.941	MGP_NODShiLtJ_G0020442	Ddx41	65	37.232
MGP_NODShiLtJ_G0034865	Ddx43	56	32.240	MGP_NODShiLtJ_G0022507	Eif4a2	91	31.398
MGP_NODShiLtJ_G0034865	Ddx43	53	32.044	MGP_NODShiLtJ_G0029900	Ddx55	58	32.044
MGP_NODShiLtJ_G0034865	Ddx43	58	31.332	MGP_NODShiLtJ_G0018394	Eif4a1	92	31.332
MGP_NODShiLtJ_G0034865	Ddx43	57	40.310	MGP_NODShiLtJ_G0035370	Ddx3x	61	39.259
MGP_NODShiLtJ_G0034865	Ddx43	54	31.831	MGP_NODShiLtJ_G0019335	Eif4a3	84	31.831
MGP_NODShiLtJ_G0034865	Ddx43	60	39.012	MGP_NODShiLtJ_G0016790	D1Pas1	61	39.012
MGP_NODShiLtJ_G0034865	Ddx43	68	43.624	MGP_NODShiLtJ_G0019166	Ddx5	89	43.968
MGP_NODShiLtJ_G0034865	Ddx43	68	43.527	MGP_NODShiLtJ_G0021907	Ddx17	67	43.527
MGP_NODShiLtJ_G0034865	Ddx43	62	33.580	MGP_NODShiLtJ_G0016413	Ddx59	64	33.333
MGP_NODShiLtJ_G0034865	Ddx43	60	34.913	MGP_NODShiLtJ_G0033504	Ddx49	93	34.897
MGP_NODShiLtJ_G0034865	Ddx43	74	36.270	MGP_NODShiLtJ_G0019151	Ddx42	50	36.270
MGP_NODShiLtJ_G0034865	Ddx43	54	30.159	MGP_NODShiLtJ_G0033877	Ddx28	70	30.423
MGP_NODShiLtJ_G0034865	Ddx43	63	34.135	MGP_NODShiLtJ_G0018712	Ddx52	69	34.135