EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0034931 (Gene tree)
Gene ID: -
Gene Symbol: Plod2
Alias: D530025C14Rik|LH2|Plod-2|lysyl hydroxylase 2
Full Name: procollagen lysine%2C 2-oxoglutarate 5-dioxygenase 2
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Plus strand
Length: 72032 bases
Position: chr9:101517341-101589372
Accession: 1347007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0093189	2OG-FeII_Oxy	PF03171.20	1.3e-05	1	1
MGP_NODShiLtJ_P0093190	2OG-FeII_Oxy	PF03171.20	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0093191	-	844	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0093190	-	3662	-	MGP_NODShiLtJ_P0093190	758 (aa)	-	-
MGP_NODShiLtJ_T0093193	-	1276	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0093189	-	3648	-	MGP_NODShiLtJ_P0093189	737 (aa)	-	Q9R0B9
MGP_NODShiLtJ_T0093192	-	596	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0034931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0034931's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0034931	Plod2	95	60.313	MGP_NODShiLtJ_G0028914	Plod1	99	59.041
MGP_NODShiLtJ_G0034931	Plod2	95	59.829	MGP_NODShiLtJ_G0030015	Plod3	100	57.895