EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0035199 (Gene tree)
Gene ID: -
Gene Symbol: Rbms3
Alias: 6720477E09Rik|8430436O14Rik
Full Name: RNA binding motif%2C single stranded interacting protein
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 1140462 bases
Position: chr9:128139249-129279710
Accession: 2444477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0094653	RRM_1	PF00076.22	1.5e-32	1	2
MGP_NODShiLtJ_P0094653	RRM_1	PF00076.22	1.5e-32	2	2
MGP_NODShiLtJ_P0094650	RRM_1	PF00076.22	1.2e-31	1	2
MGP_NODShiLtJ_P0094650	RRM_1	PF00076.22	1.2e-31	2	2
MGP_NODShiLtJ_P0094647	RRM_1	PF00076.22	1.4e-31	1	2
MGP_NODShiLtJ_P0094647	RRM_1	PF00076.22	1.4e-31	2	2
MGP_NODShiLtJ_P0094645	RRM_1	PF00076.22	1.5e-31	1	2
MGP_NODShiLtJ_P0094645	RRM_1	PF00076.22	1.5e-31	2	2
MGP_NODShiLtJ_P0094649	RRM_1	PF00076.22	1.5e-31	1	2
MGP_NODShiLtJ_P0094649	RRM_1	PF00076.22	1.5e-31	2	2
MGP_NODShiLtJ_P0094644	RRM_1	PF00076.22	1.7e-31	1	2
MGP_NODShiLtJ_P0094644	RRM_1	PF00076.22	1.7e-31	2	2
MGP_NODShiLtJ_P0094648	RRM_1	PF00076.22	2e-31	1	2
MGP_NODShiLtJ_P0094648	RRM_1	PF00076.22	2e-31	2	2
MGP_NODShiLtJ_P0094651	RRM_1	PF00076.22	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0094644	-	7866	XM_017313248	MGP_NODShiLtJ_P0094644	431 (aa)	XP_017168737	Q8BWL5
MGP_NODShiLtJ_T0094645	-	3278	-	MGP_NODShiLtJ_P0094645	414 (aa)	-	-
MGP_NODShiLtJ_T0094646	-	1589	-	MGP_NODShiLtJ_P0094646	185 (aa)	-	-
MGP_NODShiLtJ_T0094647	-	2122	-	MGP_NODShiLtJ_P0094647	402 (aa)	-	-
MGP_NODShiLtJ_T0094655	-	1753	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0094652	-	2027	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0094651	-	585	-	MGP_NODShiLtJ_P0094651	194 (aa)	-	-
MGP_NODShiLtJ_T0094648	-	2084	-	MGP_NODShiLtJ_P0094648	463 (aa)	-	-
MGP_NODShiLtJ_T0094649	-	2192	-	MGP_NODShiLtJ_P0094649	415 (aa)	-	-
MGP_NODShiLtJ_T0094653	-	619	-	MGP_NODShiLtJ_P0094653	206 (aa)	-	-
MGP_NODShiLtJ_T0094650	-	1983	-	MGP_NODShiLtJ_P0094650	386 (aa)	-	-
MGP_NODShiLtJ_T0094654	-	1438	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0035199's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0035199	Rbms3	83	37.222	MGP_NODShiLtJ_G0028254	Elavl2	69	37.209
MGP_NODShiLtJ_G0035199	Rbms3	77	33.708	MGP_NODShiLtJ_G0022964	Pabpc6	60	34.091
MGP_NODShiLtJ_G0035199	Rbms3	76	39.474	MGP_NODShiLtJ_G0027371	Celf3	91	39.474
MGP_NODShiLtJ_G0035199	Rbms3	75	37.079	MGP_NODShiLtJ_G0025170	Celf2	77	39.474
MGP_NODShiLtJ_G0035199	Rbms3	68	43.421	MGP_NODShiLtJ_G0025961	Celf1	53	43.421
MGP_NODShiLtJ_G0035199	Rbms3	72	40.789	MGP_NODShiLtJ_G0024036	Celf4	68	40.789
MGP_NODShiLtJ_G0035199	Rbms3	77	30.818	MGP_NODShiLtJ_G0026654	Pabpc1l	59	30.818
MGP_NODShiLtJ_G0035199	Rbms3	99	80.841	MGP_NODShiLtJ_G0025600	Rbms1	96	71.538
MGP_NODShiLtJ_G0035199	Rbms3	83	37.097	MGP_NODShiLtJ_G0028383	Elavl4	70	36.458
MGP_NODShiLtJ_G0035199	Rbms3	82	42.105	MGP_NODShiLtJ_G0034700	Celf6	52	42.105
MGP_NODShiLtJ_G0035199	Rbms3	97	34.356	MGP_NODShiLtJ_G0033137	Elavl1	91	34.356
MGP_NODShiLtJ_G0035199	Rbms3	70	38.562	MGP_NODShiLtJ_G0034273	Elavl3	63	37.931
MGP_NODShiLtJ_G0035199	Rbms3	83	80.663	MGP_NODShiLtJ_G0017710	Rbms2	86	66.758
MGP_NODShiLtJ_G0035199	Rbms3	93	36.134	MGP_NODShiLtJ_G0017421	Celf5	57	42.105