EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NODShiLtJ_G0035337 (Gene tree)
Gene ID: -
Gene Symbol: Rbm3
Alias: 2600016C11Rik
Full Name: RNA binding motif protein 3
Gene Type: protein_coding
Species: Mus_musculus_nodshiltj
Status: putative
Strand: Minus strand
Length: 7223 bases
Position: chrX:2980567-2987789
Accession: 1099460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NODShiLtJ_P0095111	RRM_1	PF00076.22	1.8e-24	1	1
MGP_NODShiLtJ_P0095110	RRM_1	PF00076.22	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NODShiLtJ_T0095113	-	1208	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0095112	-	1055	-	MGP_NODShiLtJ_P0095112	90 (aa)	-	-
MGP_NODShiLtJ_T0095111	-	969	-	MGP_NODShiLtJ_P0095111	153 (aa)	-	-
MGP_NODShiLtJ_T0095110	-	2792	-	MGP_NODShiLtJ_P0095110	154 (aa)	-	-
MGP_NODShiLtJ_T0095115	-	721	-	-	- (aa)	-	-
MGP_NODShiLtJ_T0095114	-	574	-	MGP_NODShiLtJ_P0095114	154 (aa)	-	-
MGP_NODShiLtJ_T0095109	-	2234	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NODShiLtJ_G0035337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0035337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NODShiLtJ_G0035337	Rbm3	82	38.710	MGP_NODShiLtJ_G0028383	Elavl4	58	31.646
MGP_NODShiLtJ_G0035337	Rbm3	80	36.709	MGP_NODShiLtJ_G0029581	Hnrnpd	70	34.667
MGP_NODShiLtJ_G0035337	Rbm3	73	33.333	MGP_NODShiLtJ_G0029897	Snrnp35	55	34.848
MGP_NODShiLtJ_G0035337	Rbm3	82	38.710	MGP_NODShiLtJ_G0028254	Elavl2	63	32.911
MGP_NODShiLtJ_G0035337	Rbm3	100	63.529	MGP_NODShiLtJ_G0017347	Cirbp	99	60.588
MGP_NODShiLtJ_G0035337	Rbm3	99	35.955	MGP_NODShiLtJ_G0030780	Tia1	70	41.333
MGP_NODShiLtJ_G0035337	Rbm3	82	43.243	MGP_NODShiLtJ_G0018774	Msi2	61	42.857
MGP_NODShiLtJ_G0035337	Rbm3	78	55.714	MGP_NODShiLtJ_G0035535	Rbmx	79	56.790
MGP_NODShiLtJ_G0035337	Rbm3	90	39.326	MGP_NODShiLtJ_G0017353	Dazap1	78	46.032
MGP_NODShiLtJ_G0035337	Rbm3	90	35.385	MGP_NODShiLtJ_G0027002	Pabpc4l	83	34.286
MGP_NODShiLtJ_G0035337	Rbm3	87	40.000	MGP_NODShiLtJ_G0028543	Pabpc4	90	37.500