EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NODShiLtJ_G0035559 (Gene tree)
Gene ID
-
Gene Symbol
Fmr1
Alias
FMRP|Fmr-1
Full Name
fragile X mental retardation syndrome 1
Gene Type
protein_coding
Species
Mus_musculus_nodshiltj
Status
putative
Strand
Plus strand
Length
49065 bases
Position
chrX:70388797-70437861
Accession
95564
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NODShiLtJ_P0095748KH_1PF00013.292.4e-1512
MGP_NODShiLtJ_P0095748KH_1PF00013.292.4e-1522
MGP_NODShiLtJ_P0095747KH_1PF00013.292.5e-1512
MGP_NODShiLtJ_P0095747KH_1PF00013.292.5e-1522
MGP_NODShiLtJ_P0095750KH_1PF00013.292.6e-1512
MGP_NODShiLtJ_P0095750KH_1PF00013.292.6e-1522
MGP_NODShiLtJ_P0095743KH_1PF00013.292.8e-1512
MGP_NODShiLtJ_P0095743KH_1PF00013.292.8e-1522
MGP_NODShiLtJ_P0095749KH_1PF00013.293e-1512
MGP_NODShiLtJ_P0095749KH_1PF00013.293e-1522
MGP_NODShiLtJ_P0095746KH_1PF00013.297.1e-1111
MGP_NODShiLtJ_P0095748AgenetPF05641.122.1e-1111
MGP_NODShiLtJ_P0095750AgenetPF05641.122.3e-1111
MGP_NODShiLtJ_P0095747AgenetPF05641.122.3e-1111
MGP_NODShiLtJ_P0095743AgenetPF05641.122.7e-1111
MGP_NODShiLtJ_P0095749AgenetPF05641.122.8e-1111
MGP_NODShiLtJ_P0095746AgenetPF05641.122.8e-1111
MGP_NODShiLtJ_P0095743FXMRP1_C_corePF12235.81.3e-4011
MGP_NODShiLtJ_P0095749FXMRP1_C_corePF12235.81.5e-4011
MGP_NODShiLtJ_P0095746FXMRP1_C_corePF12235.82.4e-4011
MGP_NODShiLtJ_P0095750FXMRP1_C_corePF12235.82.5e-4011
MGP_NODShiLtJ_P0095747FXMRP1_C_corePF12235.86.5e-2611
MGP_NODShiLtJ_P0095748FXMRP1_C_corePF12235.81.6e-2511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NODShiLtJ_T0095750-3750-MGP_NODShiLtJ_P0095750564 (aa)--
MGP_NODShiLtJ_T0095748-3735-MGP_NODShiLtJ_P0095748556 (aa)--
MGP_NODShiLtJ_T0095749-3873-MGP_NODShiLtJ_P0095749602 (aa)--
MGP_NODShiLtJ_T0095746-3931-MGP_NODShiLtJ_P0095746562 (aa)--
MGP_NODShiLtJ_T0095747-3807-MGP_NODShiLtJ_P0095747560 (aa)--
MGP_NODShiLtJ_T0095744-2871--- (aa)--
MGP_NODShiLtJ_T0095745-719--- (aa)--
MGP_NODShiLtJ_T0095751-1951--- (aa)--
MGP_NODShiLtJ_T0095743-4083XM_006527810MGP_NODShiLtJ_P0095743585 (aa)XP_006527873D3Z6U8
MGP_NODShiLtJ_T0095753-646--- (aa)--
MGP_NODShiLtJ_T0095752-588--- (aa)--
Gene Model
Click here to download MGP_NODShiLtJ_G0035559's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NODShiLtJ_G0035559's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NODShiLtJ_G0035559Fmr18165.142MGP_NODShiLtJ_G0026962Fxr17965.000
MGP_NODShiLtJ_G0035559Fmr18160.085MGP_NODShiLtJ_G0018390Fxr26761.229

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