EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0016340 (Gene tree)
Gene ID: -
Gene Symbol: Rab23
Alias: AW545388|opb|opb2
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 25739 bases
Position: chr1:31655964-31681702
Accession: 99833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0019672	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_NZOHlLtJ_P0019676	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0019679	-	1764	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0019678	-	437	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0019673	-	4398	-	MGP_NZOHlLtJ_P0019673	64 (aa)	-	-
MGP_NZOHlLtJ_T0019672	-	4322	-	MGP_NZOHlLtJ_P0019672	237 (aa)	-	-
MGP_NZOHlLtJ_T0019671	-	2557	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0019670	-	444	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0019677	-	1966	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0019676	-	4218	-	MGP_NZOHlLtJ_P0019676	237 (aa)	-	-
MGP_NZOHlLtJ_T0019675	-	1087	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0019674	-	2047	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0016340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0016340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0016340	Rab23	64	38.462	MGP_NZOHlLtJ_G0019199	Rab34	60	38.462
MGP_NZOHlLtJ_G0016340	Rab23	67	38.125	MGP_NZOHlLtJ_G0024338	Rab5a	74	38.125
MGP_NZOHlLtJ_G0016340	Rab23	61	31.507	MGP_NZOHlLtJ_G0033728	Hras	98	30.332
MGP_NZOHlLtJ_G0016340	Rab23	69	35.119	MGP_NZOHlLtJ_G0024437	Rab12	57	35.119
MGP_NZOHlLtJ_G0016340	Rab23	67	31.765	MGP_NZOHlLtJ_G0030847	Rasl11a	69	31.765
MGP_NZOHlLtJ_G0016340	Rab23	65	34.375	MGP_NZOHlLtJ_G0036792	Rab9	79	34.375
MGP_NZOHlLtJ_G0016340	Rab23	75	32.961	MGP_NZOHlLtJ_G0019802	Rab37	81	32.961
MGP_NZOHlLtJ_G0016340	Rab23	70	34.337	MGP_NZOHlLtJ_G0018498	Rab1a	81	34.337
MGP_NZOHlLtJ_G0016340	Rab23	80	32.984	MGP_NZOHlLtJ_G0035457	Rab11a	92	34.752
MGP_NZOHlLtJ_G0016340	Rab23	68	33.129	MGP_NZOHlLtJ_G0032059	Rasl2-9	74	33.129
MGP_NZOHlLtJ_G0016340	Rab23	74	37.500	MGP_NZOHlLtJ_G0033019	Rab30	87	37.500
MGP_NZOHlLtJ_G0016340	Rab23	70	34.337	MGP_NZOHlLtJ_G0025154	Rab1b	83	34.337
MGP_NZOHlLtJ_G0016340	Rab23	66	39.873	MGP_NZOHlLtJ_G0033079	Rab6a	76	39.873
MGP_NZOHlLtJ_G0016340	Rab23	75	32.086	MGP_NZOHlLtJ_G0030095	Rasl11b	74	32.086
MGP_NZOHlLtJ_G0016340	Rab23	65	36.129	MGP_NZOHlLtJ_G0029820	Rheb	84	36.129
MGP_NZOHlLtJ_G0016340	Rab23	65	36.538	MGP_NZOHlLtJ_G0036387	Rab39b	73	36.538
MGP_NZOHlLtJ_G0016340	Rab23	72	34.682	MGP_NZOHlLtJ_G0020291	Rab15	81	34.682
MGP_NZOHlLtJ_G0016340	Rab23	77	38.172	MGP_NZOHlLtJ_G0017784	Rab36	69	38.172
MGP_NZOHlLtJ_G0016340	Rab23	75	34.831	MGP_NZOHlLtJ_G0030446	Rab35	95	33.684
MGP_NZOHlLtJ_G0016340	Rab23	80	33.508	MGP_NZOHlLtJ_G0023982	Rab11b	88	33.508
MGP_NZOHlLtJ_G0016340	Rab23	65	33.766	MGP_NZOHlLtJ_G0027439	Rab22a	79	33.766
MGP_NZOHlLtJ_G0016340	Rab23	83	32.487	MGP_NZOHlLtJ_G0028511	Rab2a	95	31.863
MGP_NZOHlLtJ_G0016340	Rab23	77	31.383	MGP_NZOHlLtJ_G0036210	Rab33a	79	31.383
MGP_NZOHlLtJ_G0016340	Rab23	66	37.654	MGP_NZOHlLtJ_G0036637	Rab9b	80	37.654
MGP_NZOHlLtJ_G0016340	Rab23	86	32.850	MGP_NZOHlLtJ_G0021721	Rab2b	94	32.850
MGP_NZOHlLtJ_G0016340	Rab23	70	33.918	MGP_NZOHlLtJ_G0031468	Rab7	94	43.478
MGP_NZOHlLtJ_G0016340	Rab23	85	31.683	MGP_NZOHlLtJ_G0027878	Rab25	92	31.683
MGP_NZOHlLtJ_G0016340	Rab23	74	35.227	MGP_NZOHlLtJ_G0019596	Rab5c	81	35.227
MGP_NZOHlLtJ_G0016340	Rab23	72	35.465	MGP_NZOHlLtJ_G0024584	Rab18	83	35.465
MGP_NZOHlLtJ_G0016340	Rab23	80	30.890	MGP_NZOHlLtJ_G0024428	Rab31	93	30.890
MGP_NZOHlLtJ_G0016340	Rab23	65	31.410	MGP_NZOHlLtJ_G0031955	Kras	94	32.778
MGP_NZOHlLtJ_G0016340	Rab23	61	32.192	MGP_NZOHlLtJ_G0028159	Nras	95	35.862
MGP_NZOHlLtJ_G0016340	Rab23	66	41.139	MGP_NZOHlLtJ_G0035708	Rab6b	76	41.139
MGP_NZOHlLtJ_G0016340	Rab23	67	35.152	MGP_NZOHlLtJ_G0027675	Rab33b	72	35.152