EuRBPDB

Description

Ensembl ID: MGP_NZOHlLtJ_G0016584 (Gene tree)
Gene ID: -
Gene Symbol: Pnkd
Alias: 2210013N15Rik|2810403H05Rik|AI854243|Brp17|Kiaa1184|MNCb-5687|MR-1|Mr1|Tahccp2
Full Name: paroxysmal nonkinesiogenic dyskinesia
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 79282 bases
Position: chr1:74322323-74401604
Accession: 1930773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0020983	Lactamase_B	PF00753.27	2.6e-10	1	1
MGP_NZOHlLtJ_P0020970	Lactamase_B	PF00753.27	2.9e-10	1	1
MGP_NZOHlLtJ_P0020973	Lactamase_B	PF00753.27	3.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0020983	-	2859	-	MGP_NZOHlLtJ_P0020983	360 (aa)	-	-
MGP_NZOHlLtJ_T0020984	-	3599	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0020974	-	416	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0020969	-	740	XM_006496167	MGP_NZOHlLtJ_P0020969	142 (aa)	XP_006496230	Q69ZP3
MGP_NZOHlLtJ_T0020970	-	2937	-	MGP_NZOHlLtJ_P0020970	385 (aa)	-	-
MGP_NZOHlLtJ_T0020971	-	883	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0020972	-	435	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0020973	-	3054	-	MGP_NZOHlLtJ_P0020973	424 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0016584	Pnkd	63	42.105	MGP_NZOHlLtJ_G0023812	Haghl	100	40.351
MGP_NZOHlLtJ_G0016584	Pnkd	74	40.977	MGP_NZOHlLtJ_G0023771	Hagh	96	44.099