EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0016736 (Gene tree)
Gene ID: -
Gene Symbol: Lrrfip1
Alias: AU024550|FLAP (FLI LRR associated protein)|Flap|Fliiap1
Full Name: leucine rich repeat (in FLII) interacting protein 1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 137261 bases
Position: chr1:91869349-92006609
Accession: 1342770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0021761	LRRFIP	PF09738.9	7.9e-106	1	1
MGP_NZOHlLtJ_P0021766	LRRFIP	PF09738.9	1.5e-90	1	2
MGP_NZOHlLtJ_P0021766	LRRFIP	PF09738.9	1.5e-90	2	2
MGP_NZOHlLtJ_P0021762	LRRFIP	PF09738.9	7.8e-90	1	3
MGP_NZOHlLtJ_P0021762	LRRFIP	PF09738.9	7.8e-90	2	3
MGP_NZOHlLtJ_P0021762	LRRFIP	PF09738.9	7.8e-90	3	3
MGP_NZOHlLtJ_P0021764	LRRFIP	PF09738.9	8.6e-90	1	3
MGP_NZOHlLtJ_P0021764	LRRFIP	PF09738.9	8.6e-90	2	3
MGP_NZOHlLtJ_P0021764	LRRFIP	PF09738.9	8.6e-90	3	3
MGP_NZOHlLtJ_P0021763	LRRFIP	PF09738.9	1e-84	1	1
MGP_NZOHlLtJ_P0021760	LRRFIP	PF09738.9	2.2e-82	1	2
MGP_NZOHlLtJ_P0021760	LRRFIP	PF09738.9	2.2e-82	2	2
MGP_NZOHlLtJ_P0021759	LRRFIP	PF09738.9	6.9e-66	1	2
MGP_NZOHlLtJ_P0021759	LRRFIP	PF09738.9	6.9e-66	2	2
MGP_NZOHlLtJ_P0021765	LRRFIP	PF09738.9	2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0021771	-	483	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0021770	-	215	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0021759	-	1031	XM_006529175	MGP_NZOHlLtJ_P0021759	323 (aa)	XP_006529238	Q3UZ39
MGP_NZOHlLtJ_T0021768	-	2603	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0021769	-	621	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0021766	-	2150	-	MGP_NZOHlLtJ_P0021766	663 (aa)	-	-
MGP_NZOHlLtJ_T0021767	-	3992	-	MGP_NZOHlLtJ_P0021767	913 (aa)	-	-
MGP_NZOHlLtJ_T0021764	-	2755	-	MGP_NZOHlLtJ_P0021764	628 (aa)	-	-
MGP_NZOHlLtJ_T0021765	-	442	-	MGP_NZOHlLtJ_P0021765	98 (aa)	-	-
MGP_NZOHlLtJ_T0021762	-	2879	-	MGP_NZOHlLtJ_P0021762	638 (aa)	-	-
MGP_NZOHlLtJ_T0021763	-	3634	-	MGP_NZOHlLtJ_P0021763	729 (aa)	-	-
MGP_NZOHlLtJ_T0021760	-	1747	-	MGP_NZOHlLtJ_P0021760	575 (aa)	-	-
MGP_NZOHlLtJ_T0021761	-	2050	-	MGP_NZOHlLtJ_P0021761	428 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0016736's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0016736	Lrrfip1	99	60.890	MGP_NZOHlLtJ_G0035888	Lrrfip2	100	67.630