EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0016852 (Gene tree)
Gene ID: -
Gene Symbol: Ddx18
Alias: 2310005B10Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 14145 bases
Position: chr1:123200475-123214619
Accession: 1914192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0022280	ResIII	PF04851.15	4.6e-06	1	1
MGP_NZOHlLtJ_P0022280	DEAD	PF00270.29	1.8e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0022280	-	2258	XM_006529794	MGP_NZOHlLtJ_P0022280	660 (aa)	XP_006529857	Q8K363
MGP_NZOHlLtJ_T0022281	-	622	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0022282	-	512	-	MGP_NZOHlLtJ_P0022282	170 (aa)	-	-
MGP_NZOHlLtJ_T0022283	-	451	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0016852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0016852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0016852	Ddx18	50	34.111	MGP_NZOHlLtJ_G0021029	Ddx41	54	34.111
MGP_NZOHlLtJ_G0016852	Ddx18	61	38.462	MGP_NZOHlLtJ_G0027386	Ddx27	53	38.221
MGP_NZOHlLtJ_G0016852	Ddx18	64	32.294	MGP_NZOHlLtJ_G0030480	Ddx54	50	32.366
MGP_NZOHlLtJ_G0016852	Ddx18	65	36.327	MGP_NZOHlLtJ_G0026009	Ddx31	72	36.327
MGP_NZOHlLtJ_G0016852	Ddx18	55	32.990	MGP_NZOHlLtJ_G0019295	Ddx52	68	31.935
MGP_NZOHlLtJ_G0016852	Ddx18	66	46.241	MGP_NZOHlLtJ_G0035321	Ddx10	50	46.241
MGP_NZOHlLtJ_G0016852	Ddx18	50	30.628	MGP_NZOHlLtJ_G0030361	Ddx51	59	31.070
MGP_NZOHlLtJ_G0016852	Ddx18	53	33.155	MGP_NZOHlLtJ_G0017358	D1Pas1	56	33.155
MGP_NZOHlLtJ_G0016852	Ddx18	68	36.192	MGP_NZOHlLtJ_G0030570	Ddx55	77	36.042
MGP_NZOHlLtJ_G0016852	Ddx18	55	38.798	MGP_NZOHlLtJ_G0031887	Ddx47	88	37.978
MGP_NZOHlLtJ_G0016852	Ddx18	50	32.628	MGP_NZOHlLtJ_G0018979	Eif4a1	73	32.493
MGP_NZOHlLtJ_G0016852	Ddx18	57	34.351	MGP_NZOHlLtJ_G0017737	Ddx50	61	32.867
MGP_NZOHlLtJ_G0016852	Ddx18	56	34.974	MGP_NZOHlLtJ_G0035581	Ddx43	55	34.974
MGP_NZOHlLtJ_G0016852	Ddx18	56	36.148	MGP_NZOHlLtJ_G0034213	Ddx49	92	38.066
MGP_NZOHlLtJ_G0016852	Ddx18	50	33.134	MGP_NZOHlLtJ_G0019742	Ddx5	74	31.699
MGP_NZOHlLtJ_G0016852	Ddx18	51	30.769	MGP_NZOHlLtJ_G0034352	Ddx39	81	30.312
MGP_NZOHlLtJ_G0016852	Ddx18	52	33.333	MGP_NZOHlLtJ_G0022501	Ddx17	53	33.333
MGP_NZOHlLtJ_G0016852	Ddx18	53	33.144	MGP_NZOHlLtJ_G0016981	Ddx59	55	33.144
MGP_NZOHlLtJ_G0016852	Ddx18	53	33.155	MGP_NZOHlLtJ_G0036083	Ddx3x	56	33.422