EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0017737 (Gene tree)
Gene ID: -
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II|RH-II/Gubeta
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 38166 bases
Position: chr10:61567201-61605366
Accession: 2182303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0025949	GUCT	PF08152.12	4.8e-28	1	1
MGP_NZOHlLtJ_P0025949	ResIII	PF04851.15	5.9e-10	1	1
MGP_NZOHlLtJ_P0025949	DEAD	PF00270.29	1.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0025948	-	2627	XM_006514345	MGP_NZOHlLtJ_P0025948	669 (aa)	XP_006514408	Q99MJ9
MGP_NZOHlLtJ_T0025949	-	2527	-	MGP_NZOHlLtJ_P0025949	734 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0017737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0017737's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0017737	Ddx50	90	66.446	MGP_NZOHlLtJ_G0017736	Ddx21	71	64.217
MGP_NZOHlLtJ_G0017737	Ddx50	54	31.383	MGP_NZOHlLtJ_G0036083	Ddx3x	52	33.239
MGP_NZOHlLtJ_G0017737	Ddx50	53	33.799	MGP_NZOHlLtJ_G0035581	Ddx43	54	33.799
MGP_NZOHlLtJ_G0017737	Ddx50	53	32.603	MGP_NZOHlLtJ_G0021029	Ddx41	57	32.603
MGP_NZOHlLtJ_G0017737	Ddx50	61	32.867	MGP_NZOHlLtJ_G0016852	Ddx18	57	34.351
MGP_NZOHlLtJ_G0017737	Ddx50	51	34.302	MGP_NZOHlLtJ_G0019742	Ddx5	70	33.446
MGP_NZOHlLtJ_G0017737	Ddx50	55	31.267	MGP_NZOHlLtJ_G0023106	-	90	30.904
MGP_NZOHlLtJ_G0017737	Ddx50	61	30.918	MGP_NZOHlLtJ_G0031887	Ddx47	94	30.424
MGP_NZOHlLtJ_G0017737	Ddx50	54	33.962	MGP_NZOHlLtJ_G0022501	Ddx17	55	33.962
MGP_NZOHlLtJ_G0017737	Ddx50	61	34.272	MGP_NZOHlLtJ_G0027386	Ddx27	52	34.129
MGP_NZOHlLtJ_G0017737	Ddx50	55	32.353	MGP_NZOHlLtJ_G0019909	Eif4a3	86	32.353
MGP_NZOHlLtJ_G0017737	Ddx50	55	32.172	MGP_NZOHlLtJ_G0018979	Eif4a1	74	31.720
MGP_NZOHlLtJ_G0017737	Ddx50	54	31.383	MGP_NZOHlLtJ_G0017358	D1Pas1	56	32.181